Evidence map›Paper›PMID 40380882›Full record

ReviewBiochemical Society transactions2025

Advances in ribosome profiling technologies.

Kotaro Tomuro, Shintaro Iwasaki

Abstract readReview
In one paragraph

Review in Biochemical Society transactions, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Review
  2. Integrated Transcriptomic Analysis of Skin Pigmentation Development inInternational journal of molecular sciences · 2026
    Article
  3. Review
  4. Review
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Kotaro TomuroRNA Systems Biochemistry Laboratory, Pioneering Research Institute, RIKEN, Wako, Saitama 351-0198, Japan.ORCID 0009-0008-3513-4507
Shintaro IwasakiRNA Systems Biochemistry Laboratory, Pioneering Research Institute, RIKEN, Wako, Saitama 351-0198, Japan.ORCID 0000-0001-7724-3754

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ribosome profiling (or Ribo-seq) has emerged as a powerful approach for revealing the regulatory mechanisms of protein synthesis, on the basis of deep sequencing of ribosome footprints. Recent innovations in Ribo-seq technologies have significantly enhanced their sensitivity, specificity, and resolution. In this review, we outline emerging Ribo-seq derivatives that overcome barriers in low inputs, rRNA contamination, data calibration, and single-cell applications. These advances enable detailed insights into translational control across diverse biological contexts.

Indexed as

RibosomesAnimalsHigh-Throughput Nucleotide SequencingHumansProtein BiosynthesisRibosome ProfilingRNA, RibosomalSequence Analysis, RNASingle-Cell AnalysisRNA, Ribosomaldeep sequencingribo-seqribosome profilingtranslational control

Identifiers

PMID40380882
PMCPMC12224887

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.