Evidence map›Paper›PMID 40380277›Full record

ArticleMicrobiome2025

Host taxonomy and environment shapes insectivore viromes and viral spillover risks in Southwestern China.

Ji-Hu Yang, Chun-Feng Luo, Rong Xiang, Jiu-Meng Min, Zong-Ti Shao, Yi-Lin Zhao, Lu Chen, Lin Huang, Yun Zhang, Shun-Shuai Liu and 7 more

Abstract read
In one paragraph

Article in Microbiome, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Ji-Hu Yang *State Key Laboratory of Pathogen and Biosecurity, Academy of Military Medical Sciences, Beijing, 100071, People's Republic of China.
Chun-Feng Luo *State Key Laboratory of Pathogen and Biosecurity, Academy of Military Medical Sciences, Beijing, 100071, People's Republic of China.
Rong Xiang *State Key Laboratory of Pathogen and Biosecurity, Academy of Military Medical Sciences, Beijing, 100071, People's Republic of China.
Jiu-Meng Min *Huo-Yan Engineering Technology, BGI-Shenzhen, Shenzhen, 518083, People's Republic of China.
Zong-Ti Shao *Yunnan Key Laboratory for Zoonosis Control and Prevention, Yunnan Institute for Endemic Diseases Control and Prevention, Dali, 671000, People's Republic of China.
Yi-Lin ZhaoState Key Laboratory of Pathogen and Biosecurity, Academy of Military Medical Sciences, Beijing, 100071, People's Republic of China.
Lu ChenBeijing Macro & Micro-Test Bio-Tech Co., Ltd, Beijing, 101300, People's Republic of China.
Lin HuangState Key Laboratory of Pathogen and Biosecurity, Academy of Military Medical Sciences, Beijing, 100071, People's Republic of China.
Yun ZhangYunnan Key Laboratory for Zoonosis Control and Prevention, Yunnan Institute for Endemic Diseases Control and Prevention, Dali, 671000, People's Republic of China.
Shun-Shuai LiuState Key Laboratory of Pathogen and Biosecurity, Academy of Military Medical Sciences, Beijing, 100071, People's Republic of China.
Yu-Qiong LiYunnan Key Laboratory for Zoonosis Control and Prevention, Yunnan Institute for Endemic Diseases Control and Prevention, Dali, 671000, People's Republic of China.
En-Nian PuYunnan Key Laboratory for Zoonosis Control and Prevention, Yunnan Institute for Endemic Diseases Control and Prevention, Dali, 671000, People's Republic of China.
Wen-Qiang ShiState Key Laboratory of Pathogen and Biosecurity, Academy of Military Medical Sciences, Beijing, 100071, People's Republic of China.
Hai-Feng PanSchool of Public Health, Anhui Medical University, Hefei, 230032, People's Republic of China.
Wei-Jun ChenHuo-Yan Engineering Technology, BGI-Shenzhen, Shenzhen, 518083, People's Republic of China. chenwj@genomics.cn.
Chun-Hong DuYunnan Key Laboratory for Zoonosis Control and Prevention, Yunnan Institute for Endemic Diseases Control and Prevention, Dali, 671000, People's Republic of China. dch6890728@163.com.
Jia-Fu JiangState Key Laboratory of Pathogen and Biosecurity, Academy of Military Medical Sciences, Beijing, 100071, People's Republic of China. jiangjf2008@139.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundZoonotic viruses originating from small mammals pose significant challenges to public health on a global scale. Insectivores, serving as natural reservoirs for a diverse array of zoonotic viruses, are known to carry a multitude of viral species. However, compared to the extensive research conducted on rodents (Rodentia) and bats (Chiroptera), the role of insectivores in harboring and transmitting unknown pathogens remains underexplored, which may lead to a severe underestimation of their contributions and impact to global public health.

resultsThis study employed a meta-transcriptomic approach to profile the viromes of 214 individual insectivores, encompassing 13 species from the families Soricidae, Erinaceidae, and Talpidae, collected across 12 counties in Yunnan Province, a recognized zoonotic hotspot. Based on virus reads, the analysis identified 42 viral families associated with vertebrates, highlighting significant virome diversity and host-specific viral tropisms among shrews, hedgehogs, and moles, along with notable geographic and environmental specificity of the viruses. Shrews exhibited greater viral richness and abundance compared to hedgehogs and moles, with variations influenced predominantly by host taxonomy, altitude, and geographic location. A total of 114 RNA-dependent RNA polymerase sequences were obtained, leading to the identification of 68 viruses, including 57 novel species. Instances of host jumping were observed in 11 viruses, with potential pathogenic viruses related to Mojiang paramyxovirus and members of the Hantaviridae family. Cross-species transmission was predominantly observed in viruses carried by shrews, while moles may play a pivotal role in facilitating viral transmission among insectivores.

conclusionsThis study enhances the understanding of the high diversity of mammalian viruses among insectivores in a relatively confined region and underscores the associations between virome composition and related zoonotic risks, providing a foundation for proactive measures to prevent and control the spillover of emerging zoonotic pathogens and potential future outbreaks. Video Abstract.

Indexed as

ViromeVirusesAnimalsChinaChiropteraDisease ReservoirsHumansZoonosesEmerging infectious diseasesEnvironmentInsectivoreViral evolutionVirome

Identifiers

PMID40380277
PMCPMC12083107

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.