Evidence map›Paper›PMID 40380234›Full record

ArticleJournal of translational medicine2025

Transcriptomic characterization of GMP-compliant regulatory macrophages (TRI-001) under inflammatory and hypoxic conditions: a comparative analysis across macrophage subtypes.

Karina Zitta, Rouven Berndt, Katharina Hess, Fred Fändrich, Olga Gurvich, Katja Sirviö, Tuija Kekarainen, Lars Hummitzsch, Yuk Lung Wong, Ole Sattler and 7 more

Abstract readComparative Study
In one paragraph

Article in Journal of translational medicine, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Karina ZittaDepartment of Anesthesiology and Intensive Care Medicine, University Hospital Schleswig- Holstein, Schwanenweg 21, Kiel, Germany.
Rouven BerndtClinic of Vascular Medicine, University Heart and Vascular Center Hamburg, University Medical Center Hamburg-Eppendorf, Hamburg, Germany.
Katharina HessICRSM Institute for Clinical Research and Systems Medicine, HMU Health and Medical University, Potsdam, Germany.
Fred FändrichDepartment for Applied Cell Therapy, University Hospital Schleswig-Holstein, Kiel, Germany.
Olga GurvichFerring Ventures Oy, Kuopio, Finland.
Katja SirviöFerring Ventures Oy, Kuopio, Finland.
Tuija KekarainenFerring Ventures Oy, Kuopio, Finland.
Lars HummitzschDepartment of Anesthesiology and Intensive Care Medicine, University Hospital Schleswig- Holstein, Schwanenweg 21, Kiel, Germany.
Yuk Lung WongVascular Research Center, University Hospital of Schleswig-Holstein, Kiel, Germany.
Ole SattlerDepartment of Anesthesiology and Intensive Care Medicine, University Hospital Schleswig- Holstein, Schwanenweg 21, Kiel, Germany.
Steven Braem3D-PharmXchange, Tilburg, The Netherlands.
Mark Krebs3D-PharmXchange, Tilburg, The Netherlands.
Axel FudickarDepartment of Anesthesiology and Intensive Care Medicine, University Hospital Schleswig- Holstein, Schwanenweg 21, Kiel, Germany.
Sibille EngelsFerring Ventures GmbH, Hamburg, Germany.
Nicole FlackGenevia Technologies Oy, Tampere, Finland.
Markus SteinfathDepartment of Anesthesiology and Intensive Care Medicine, University Hospital Schleswig- Holstein, Schwanenweg 21, Kiel, Germany.
Martin AlbrechtDepartment of Anesthesiology and Intensive Care Medicine, University Hospital Schleswig- Holstein, Schwanenweg 21, Kiel, Germany. martin.albrecht@uksh.de.ORCID 0000-0003-2580-768X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundRegulatory macrophages (Mreg) represent a unique subset of macrophages known for their angiogenic and anti-inflammatory properties, positioning them as promising candidates for cell-based therapies. Recently, we have differentiated and characterized a distinct Mreg subtype (TRI-001), which is currently being produced in accordance with good manufacturing practice (GMP) for a multicenter study aimed at treating patients with peripheral arterial occlusive disease (PAOD). AIM OF THE STUDY: To compare the transcriptome of TRI-001 with various in vitro differentiated macrophage subtypes to provide a comprehensive context for TRI-001 within the macrophage landscape. Additionally, we aimed to develop a detailed transcriptome profile of TRI-001 under transient hypoxic and inflammatory conditions, mimicking the microenvironment in PAOD patients.

methodsMreg were differentiated from human CD14 + monocytes using a GMP-compliant protocol and identified as TRI-001 by flow cytometry. Hypoxia was induced via an enzymatic model, while LPS treatment of TRI-001 was employed as inflammatory stimulus. Transcriptomic profiling was conducted using the Illumina HiSeq 4000 platform. In vitro cell migration assays (Oris assays) were conducted using human umbilical vein endothelial cells (HUVEC) cultured with supernatants derived from normoxia and hypoxia treated TRI-001.

resultsTRI-001 demonstrated significant transcriptomic similarities with Mreg and Mreg_UKR but were different from M0, M1, M2a, and PCMO subtypes. Under hypoxic conditions and LPS stimulation, TRI-001 displayed distinct gene expression profiles compared to TRI-001 under control conditions, with hypoxic and LPS-stimulated profiles showing notable overlap. Pathway enrichment analysis suggested the activation of chemotaxis and migration-associated pathways especially under hypoxic conditions. Findings from functional in vitro cell migration assays were inconclusive, as the secretome of TRI-001, whether cultured under hypoxic or normoxic conditions, did not elicit a significant effect on endothelial cell migration.

conclusionTRI-001 represents a novel type of regulatory macrophages (Mreg). The distinctive transcriptional responses to hypoxia and inflammatory stimuli highlight its potential as a cell therapy for the treatment of PAOD patients.

Indexed as

Gene Expression ProfilingInflammationMacrophagesTranscriptomeCell DifferentiationCell HypoxiaCell MovementHumansHuman Umbilical Vein Endothelial Cells

Identifiers

PMID40380234
PMCPMC12085010

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.