Evidence map›Paper›PMID 40379664›Full record

ArticleNature communications2025

Engineering tripartite gene editing machinery for highly efficient non-viral targeted genome integration.

Hangu Nam, Keqiang Xie, Ishita Majumdar, Jiao Wang, Shaobo Yang, Jakob Starzyk, Danna Lee, Richard Shan, Jiahe Li, Hao Wu

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Engineering Immune Cell to Counteract Aging and Aging-Associated Diseases.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors.

Hangu NamDepartment of Bioengineering, Northeastern University, Boston, MA, USA.
Keqiang XieFull Circles Therapeutics, INC., Cambridge, MA, USA.ORCID http://orcid.org/0009-0007-8320-5165
Ishita MajumdarFull Circles Therapeutics, INC., Cambridge, MA, USA.
Jiao WangFull Circles Therapeutics, INC., Cambridge, MA, USA.
Shaobo YangDepartment of Bioengineering, Northeastern University, Boston, MA, USA.ORCID http://orcid.org/0009-0006-5257-6775
Jakob StarzykFull Circles Therapeutics, INC., Cambridge, MA, USA.
Danna LeeFull Circles Therapeutics, INC., Cambridge, MA, USA.
Richard ShanFull Circles Therapeutics, INC., Cambridge, MA, USA.
Jiahe Li *Department of Biomedical Engineering, College of Engineering and School of Medicine, University of Michigan, Ann Arbor, MI, USA. jiaheli@umich.edu.ORCID http://orcid.org/0000-0002-9889-8546
Hao Wu *Full Circles Therapeutics, INC., Cambridge, MA, USA. Howard.wu@fullcirclestx.com.ORCID http://orcid.org/0009-0002-3249-2428

Funding

Enzymatic and genetic strategies for targeting disease-associated microbial metabolitesDP2GM154019 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Jiahe Li · 2023 to 2026
$2.3M
NIGMS NIH HHS DP2 GM154019
6 · The paper itself

Abstract

Non-viral DNA donor templates are commonly used for targeted genomic integration via homologous recombination (HR), with efficiency improved by CRISPR/Cas9 technology. Circular single-stranded DNA (cssDNA) has been used as a genome engineering catalyst (GATALYST) for efficient and safe gene knock-in. Here, we introduce enGager, an enhanced GATALYST associated genome editor system that increases transgene integration efficiency by tethering cssDNA donors to nuclear-localized Cas9 fused with single-stranded DNA binding peptide motifs. This approach further improves targeted integration and expression of reporter genes at multiple genomic loci in various cell types, showing up to 6-fold higher efficiency compared to unfused Cas9, especially for large transgenes in primary cells. Notably, enGager enables efficient integration of a chimeric antigen receptor (CAR) transgene in 33% of primary human T cells, enhancing anti-tumor functionality. This 'tripartite editor with ssDNA optimized genome engineering (TESOGENASE) offers a safer, more efficient alternative to viral vectors for therapeutic gene modification.

Indexed as

Gene EditingCRISPR-Associated Protein 9CRISPR-Cas SystemsDNA, CircularDNA, Single-StrandedGene Knock-In TechniquesGenetic EngineeringHEK293 CellsHomologous RecombinationHumansReceptors, Chimeric AntigenT-LymphocytesTransgenesCRISPR-Associated Protein 9DNA, CircularDNA, Single-StrandedReceptors, Chimeric Antigen

Identifiers

PMID40379664
PMCPMC12084546

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.