ArticleScientific data2025
A dataset of tissue-specific gene expression dynamics during seed development in Brassica.
Article in Scientific data, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
2 citing papers in PubMed.
- A deep learning model captures position-specific effects of plant regulatory sequences and suggests genes under complex regulation.Plant physiology · 2026Article
- A dataset of tissue-specific gene expression dynamics during seed development in Brassica.Scientific data · 2025Article
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Authors and funding
7 authors.
Funding
Abstract
In oilseed crops, e.g. oilseed rape (OSR; Brassica napus), a key developmental process is seed maturation, during which the embryo transitions from the early, globular state to the mature state. Seed development involves cell division, differentiation, and oil accumulation in specific tissue types (embryo, endosperm, and seed coat). These developmental processes impact seed quality and oil yield. High quality RNA from Brassica spp. seed tissues, from heart to mature developmental stages, was obtained using previously reported methods for five Brassica genotypes comprising winter, semi-winter and spring OSR varieties, a B. napus heritage kale and a rapid-cycling double-haploid Brassica oleracea line. RNA-seq was performed on 240 sets of samples. The resulting dataset contains detailed spatio-temporal expression profiles during seed development. In addition to the repository data, we provide easy access to this through the Seed Oilseed Rape Developmental Expression Resource (SeedORDER), which enables users to search for genes of interest and visualise expression patterns. Knowledge of where and when genes are expressed during seed development will inform future breeding efforts.
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Registered trials
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