Evidence map›Paper›PMID 40378211›Full record

ArticleScience advances2025

Dual DNA demethylation mechanisms implement epigenetic memory driven by the pioneer factor PAX7.

Juliette Harris, Alexandre Mayran, Arthur Gouhier, Yves Gauthier, Nawal Hajj Sleiman, Samir Merabet, Michael Dukatz, Pavel Bashtrykov, Albert Jeltsch, Haig Djambazian and 3 more

Abstract read
In one paragraph

Article in Science advances, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Juliette HarrisLaboratoire de génétique moléculaire, Institut de recherches cliniques de Montréal, Montréal H2W1R7, Canada.ORCID 0009-0007-1979-767X
Alexandre MayranLaboratoire de génétique moléculaire, Institut de recherches cliniques de Montréal, Montréal H2W1R7, Canada.ORCID 0000-0002-1228-0308
Arthur GouhierLaboratoire de génétique moléculaire, Institut de recherches cliniques de Montréal, Montréal H2W1R7, Canada.ORCID 0000-0003-4224-5770
Yves GauthierLaboratoire de génétique moléculaire, Institut de recherches cliniques de Montréal, Montréal H2W1R7, Canada.ORCID 0009-0001-2113-744X
Nawal Hajj SleimanInstitut de Génomique Fonctionnelle de Lyon, CNRS UMR5242, École Normale Supérieure de Lyon, Université Lyon I, Lyon 69007, France.ORCID 0000-0002-0385-543X
Samir MerabetInstitut de Génomique Fonctionnelle de Lyon, CNRS UMR5242, École Normale Supérieure de Lyon, Université Lyon I, Lyon 69007, France.ORCID 0000-0001-7629-703X
Michael DukatzDepartment of Biochemistry, Institute of Biochemistry and Technical Biochemistry, University of Stuttgart, Stuttgart 70569, Germany.ORCID 0009-0000-5550-0289
Pavel BashtrykovDepartment of Biochemistry, Institute of Biochemistry and Technical Biochemistry, University of Stuttgart, Stuttgart 70569, Germany.ORCID 0000-0003-3838-2019
Albert JeltschDepartment of Biochemistry, Institute of Biochemistry and Technical Biochemistry, University of Stuttgart, Stuttgart 70569, Germany.ORCID 0000-0001-6113-9290
Haig DjambazianVictor Phillip Dahdaleh Institute of Genomic Medicine, McGill University, Montréal H3A 0G1, Canada.ORCID 0000-0003-0222-4182
Shu-Huang ChenVictor Phillip Dahdaleh Institute of Genomic Medicine, McGill University, Montréal H3A 0G1, Canada.
Aurelio BalsalobreLaboratoire de génétique moléculaire, Institut de recherches cliniques de Montréal, Montréal H2W1R7, Canada.ORCID 0000-0002-5294-122X
Jacques DrouinLaboratoire de génétique moléculaire, Institut de recherches cliniques de Montréal, Montréal H2W1R7, Canada.ORCID 0000-0001-8226-5691

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Pioneer transcription factors have the unique ability to open chromatin at enhancers to implement new cell fates. They also provide epigenetic memory through demethylation of enhancer DNA, but the underlying mechanisms remain unclear. We now show that the pioneer paired box 7 (PAX7) triggers DNA demethylation using two replication-dependent mechanisms, including direct PAX7 interaction with the E3 ubiquitin-protein ligase (UHRF1)-DNA methyltransferase 1 (DNMT1) complex that is responsible for DNA methylation maintenance. PAX7 binds to UHRF1 and prevents its interaction with DNMT1, thus blocking activation of its enzyme activity. The ten-eleven translocation DNA dioxygenase (TET) DNA demethylases also contribute to the replication-dependent loss of DNA methylation. Thus, PAX7 hijacks UHRF1 to block activation of DNMT1 after replication, leading to loss of DNA methylation by dilution, and the process is assisted by the action of TET demethylases.

Indexed as

DNA DemethylationDNA MethylationEpigenesis, GeneticPAX7 Transcription FactorAnimalsCCAAT-Enhancer-Binding ProteinsDNA-Binding ProteinsDNA (Cytosine-5-)-Methyltransferase 1DNA ReplicationEpigenetic MemoryHumansProtein BindingUbiquitin-Protein LigasesCCAAT-Enhancer-Binding ProteinsDNA-Binding ProteinsDNA (Cytosine-5-)-Methyltransferase 1DNMT1 protein, humanPAX7 Transcription FactorUbiquitin-Protein LigasesUHRF1 protein, human

Identifiers

PMID40378211
PMCPMC12083534

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.