Evidence map›Paper›PMID 40375556›Full record

ArticleBiophysical journal2025

Interplay of protein fluctuation and associated water dynamics in osmolyte-induced stabilization.

Kuldeep Singh Negi, Subhajit Rana, Tanmoy Khan, Dipankar Mondal, Pratik Sen

Abstract read
In one paragraph

Article in Biophysical journal, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Changes in Water Dynamics by Osmolytes Regulate Enzyme Activity.The journal of physical chemistry. B · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Kuldeep Singh NegiDepartment of Chemistry, Indian Institute of Technology Kanpur, Kanpur, UP 208016, India.
Subhajit RanaDepartment of Chemistry, Indian Institute of Technology Kanpur, Kanpur, UP 208016, India.
Tanmoy KhanDepartment of Chemistry, Indian Institute of Technology Kanpur, Kanpur, UP 208016, India.
Dipankar MondalDepartment of Chemistry, Indian Institute of Technology Kanpur, Kanpur, UP 208016, India.
Pratik SenDepartment of Chemistry, Indian Institute of Technology Kanpur, Kanpur, UP 208016, India. Electronic address: psen@iitk.ac.in.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The mechanism behind osmolyte-induced protein stabilization remains elusive despite extensive research. Among various hypotheses, the associated water-modulation hypothesis has proved to be the most effective in explaining osmolyte-induced stabilization effects. Earlier, we demonstrated that osmolytes that slow down associated water dynamics enhance protein thermal stability, whereas those that accelerate it promote destabilization. However, the molecular basis of this correlation remains unclear. Using fluorescence correlation spectroscopy, we observe that osmolyte-induced changes in the associated water dynamics directly affect the internal flexibility of the protein, which is assessed through conformational fluctuation dynamics, serving as a tool to measure the protein's internal flexibility. The osmolytes that induce retardation in the associated water dynamics make the interior of the protein less flexible, as reflected by the slowed conformational fluctuation dynamics of the protein, leading to enhanced thermal stabilization. The destabilizers induce effects that are exactly opposite to stabilizers. These findings provide new insights into the interplay of associated water dynamics, protein flexibility, and stability, contributing to a deeper understanding of osmolyte-induced protein stabilization.

Indexed as

WaterProtein ConformationProtein StabilityTemperatureWater

Identifiers

PMID40375556
PMCPMC12256828

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.