ArticleScientific data2025
Chromosome-level assembly of Pseudopodoces humilis genome: A resource for avian evolutionary studies.
Article in Scientific data, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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4 authors.
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Abstract
Pseudopodoces humilis is a small passerine bird predominantly found in the mid-latitude regions of the Tibetan Plateau in Asia. A chromosome-level reference genome assembly for P. humilis was generated using PacBio CLR with Hi-C. The final genome assembly spans approximately 1.096 Gb, consisting of 1,968 contigs with a Contig N50 of 32.246 Mb, and was evaluated to be 95.60% complete using BUSCO. Hi-C chromosome mapping resulted in 33 chromosome sequences, which enabled the ordering and orientation of 329 contigs, with chromosome lengths ranging from 2.08 Mb to 152.13 Mb, covering 95.85% of the total genome sequence. Repetitive sequences comprised 144.91 Mb of the genome. A total of 381 tRNA, 507 non-coding RNA (ncRNA), and 205 rRNA were identified. In addition, we identified 17,108 protein-coding genes and 29,473 proteins, comprising a total of 17,236,726 amino acids. This high-quality genome assembly provides a strong genomic foundation for exploring critical questions in evolutionary genetics, phylogenomics, and the molecular mechanisms of adaptation - key areas for understanding biodiversity and species resilience amidst changing environments.
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