Evidence map›Paper›PMID 40373077›Full record

ArticlePloS one2025

Careful design of Large Language Model pipelines enables expert-level retrieval of evidence-based information from syntheses and databases.

Radhika Iyer, Alec Philip Christie, Anil Madhavapeddy, Sam Reynolds, William Sutherland, Sadiq Jaffer

Abstract read
In one paragraph

Article in PloS one, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
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4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Radhika IyerDepartment of Zoology, University of Cambridge, Cambridge United Kingdom.
Alec Philip ChristieDepartment of Zoology, University of Cambridge, Cambridge United Kingdom.ORCID 0000-0002-8465-8410
Anil MadhavapeddyDepartment of Computer Science & Technology, University of Cambridge, Cambridge United Kingdom.
Sam ReynoldsDepartment of Zoology, University of Cambridge, Cambridge United Kingdom.
William SutherlandDepartment of Zoology, University of Cambridge, Cambridge United Kingdom.
Sadiq JafferDepartment of Computer Science & Technology, University of Cambridge, Cambridge United Kingdom.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Wise use of evidence to support efficient conservation action is key to tackling biodiversity loss with limited time and resources. Evidence syntheses provide key recommendations for conservation decision-makers by assessing and summarising evidence, but are not always easy to access, digest, and use. Recent advances in Large Language Models (LLMs) present both opportunities and risks in enabling faster and more intuitive systems to access evidence syntheses and databases. Such systems for natural language search and open-ended evidence-based responses are pipelines comprising many components. Most critical of these components are the LLM used and how evidence is retrieved from the database. We evaluate the performance of ten LLMs across six different database retrieval strategies against human experts in answering synthetic multiple-choice question exams on the effects of conservation interventions using the Conservation Evidence database. We found that LLM performance was comparable with human experts over 45 filtered questions, both in correctly answering them and retrieving the document used to generate them. Across 1867 unfiltered questions, LLM performance demonstrated a level of conservation-specific knowledge, but this varied across topic areas. A hybrid retrieval strategy that combines keywords and vector embeddings performed best by a substantial margin. We also tested against a state-of-the-art previous generation LLM which was outperformed by all ten current models - including smaller, cheaper models. Our findings suggest that, with careful domain-specific design, LLMs could potentially be powerful tools for enabling expert-level use of evidence syntheses and databases in different disciplines. However, general LLMs used 'out-of-the-box' are likely to perform poorly and misinform decision-makers. By establishing that LLMs exhibit comparable performance with human synthesis experts on providing restricted responses to queries of evidence syntheses and databases, future work can build on our approach to quantify LLM performance in providing open-ended responses.

Indexed as

Databases, FactualInformation Storage and RetrievalNatural Language ProcessingConservation of Natural ResourcesHumansLarge Language Models

Identifiers

PMID40373077
PMCPMC12080840

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.