Evidence map›Paper›PMID 40369723›Full record

ArticleThe plant genome2025

Genome-wide locus-allele comparison reveals differential evolution dynamics from annual wild to landrace and released cultivar soybeans.

Xinyang Hu, Jianbo He, Junyi Gai

Abstract readComparative Study
In one paragraph

Article in The plant genome, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Xinyang HuSoybean Research Institute, Zhongshan Biological Breeding Laboratory (ZSBBL), MARA National Center for Soybean Improvement & MARA Key Laboratory of Biology and Genetic Improvement of Soybean, State Innovation Platform for Integrated Production and Education in Soybean Bio-Breeding, National Key Laboratory for Crop Genetics and Germplasm Enhancement, Jiangsu Collaborative Innovation Center for Modern Crop Production, Nanjing Agricultural University, Nanjing, China.ORCID https://orcid.org/0009-0008-4284-3424
Jianbo HeSoybean Research Institute, Zhongshan Biological Breeding Laboratory (ZSBBL), MARA National Center for Soybean Improvement & MARA Key Laboratory of Biology and Genetic Improvement of Soybean, State Innovation Platform for Integrated Production and Education in Soybean Bio-Breeding, National Key Laboratory for Crop Genetics and Germplasm Enhancement, Jiangsu Collaborative Innovation Center for Modern Crop Production, Nanjing Agricultural University, Nanjing, China.
Junyi GaiSoybean Research Institute, Zhongshan Biological Breeding Laboratory (ZSBBL), MARA National Center for Soybean Improvement & MARA Key Laboratory of Biology and Genetic Improvement of Soybean, State Innovation Platform for Integrated Production and Education in Soybean Bio-Breeding, National Key Laboratory for Crop Genetics and Germplasm Enhancement, Jiangsu Collaborative Innovation Center for Modern Crop Production, Nanjing Agricultural University, Nanjing, China.ORCID https://orcid.org/0000-0001-6222-2010

Funding

National Key Research and Development Program of China 2021YFD1201602National Key Research and Development Program of China 2021YFF1001204National Key Research and Development Program of China 2024YFD1201400the Key Science & Technology Project of Anhui Province 202423l10050012the MOA CARS-04 programthe MOE 111 Project B08025the Zhongshan Biological Breeding Laboratory ZSBBL-KY2023-03
6 · The paper itself

Abstract

Previous studies on population evolution relied primarily on allele frequency analysis using molecular markers or genome sequence segments, like selective sweeps. With the sequencing technique developed, we suggest the genome-wide locus-allele comparison to detect the genomic structure variation among populations. Its key point lies in taking SNP linkage disequilibrium block as uniform genomic marker for genome-wide gene and inter-gene regions to meet the requirement of multiple alleles in natural populations. A sample composed of 750 annual wild accessions (WAs), landraces (LRs), and released cultivars (RCs) of soybean from southern, northern, and northeastern China eco-regions (SC, NC, and NEC, respectively) were analyzed for their evolution dynamics involving four evolutionary processes (WA→LR→RC, WA

Indexed as

Evolution, MolecularGenome, PlantGlycine maxAllelesChinaGene FrequencyLinkage DisequilibriumPolymorphism, Single Nucleotide

Identifiers

PMID40369723
PMCPMC12078872

What OpenQuestion holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.