Evidence map›Paper›PMID 40368917›Full record

ArticleNature communications2025

Remote-controlled mechanical and directional motions of photoswitchable DNA condensates.

Hirotake Udono, Shin-Ichiro M Nomura, Masahiro Takinoue

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Mechanically Interlocked Indigo Photoswitches.Angewandte Chemie (International ed. in English) · 2026
    Article
  5. Let There be Light! Light as an Engine and Regulator in Synthetic Cells.Angewandte Chemie (International ed. in English) · 2026
    Review
  6. Article
  7. Semi-Independent Control of Stability and Mobility in DNA Condensates.Chembiochem : a European journal of chemical biology · 2026
    Article
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Hirotake UdonoDepartment of Computer Science, School of Computing, Institute of Science Tokyo, Yokohama, Kanagawa, 226-8501, Japan.ORCID http://orcid.org/0000-0002-7376-0639
Shin-Ichiro M NomuraDepartment of Robotics, Graduate School of Engineering, Tohoku University, Sendai, Miyagi, 980-8579, Japan.ORCID http://orcid.org/0000-0002-0346-130X
Masahiro TakinoueDepartment of Computer Science, School of Computing, Institute of Science Tokyo, Yokohama, Kanagawa, 226-8501, Japan. takinoue@comp.isct.ac.jp.ORCID http://orcid.org/0000-0002-3874-2670

Funding

Human Frontier Science Program (HFSP) RGP0016/2022-102MEXT | Japan Science and Technology Agency (JST) JPMJAP24B4MEXT | Japan Society for the Promotion of Science (JSPS) JP20H00619MEXT | Japan Society for the Promotion of Science (JSPS) JP20H05701MEXT | Japan Society for the Promotion of Science (JSPS) JP20H05935MEXT | Japan Society for the Promotion of Science (JSPS) JP22K14528MEXT | Japan Society for the Promotion of Science (JSPS) JP24H00070
6 · The paper itself

Abstract

Membrane-free synthetic DNA-based condensates enable programmable control of dynamic behaviors as shown by phase-separated condensates in biological cells. We demonstrate remote-controlled microflow using photocontrollable state transitions of DNA condensates, assembled from multi-branched DNA nanostructures via sticky-end (SE) hybridization. Introducing azobenzene into SEs enables their photoswitchable binding affinity, which underlies photoreversible fluidity of the resulting condensates that transition between gel/liquid/dissociated states in a wavelength-dependent manner. Leveraging base-sequence programmability, spatially coupled orthogonal DNA condensates with divergent photoresponsive capabilities perform multi-modal mechanical actions that depend on azobenzene insertion sites in the SE, including switching flows radially expanding and converging under photoswitching. Localizing photoswitching within a DNA liquid condensate generates two distinct directional motions, whose contrasting morphology, direction, and lifetime are determined by switching frequency. Numerical simulations reveal its regulatory role in weight-adjusting energy-exchanging and energy-dissipative interactions between the photoirradiated and unirradiated domains.

Indexed as

Biomolecular CondensatesDNANanostructuresAzo CompoundsLightMotionPhotochemical ProcessesazobenzeneAzo CompoundsDNA

Identifiers

PMID40368917
PMCPMC12078559

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.