Evidence map›Paper›PMID 40368897›Full record

ArticleNature communications2025

Structural and molecular basis of PCNA-activated FAN1 nuclease function in DNA repair.

F Li, A S Phadte, M Bhatia, S Barndt, A R Monte Carlo Iii, C-F D Hou, R Yang, S Strock, A Pluciennik

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

F Li *Department of Biochemistry and Molecular Biology, Thomas Jefferson University, Philadelphia, PA, USA.ORCID http://orcid.org/0000-0001-7932-0071
A S Phadte *Department of Biochemistry and Molecular Biology, Thomas Jefferson University, Philadelphia, PA, USA.ORCID http://orcid.org/0000-0001-6699-6769
M Bhatia *Department of Biochemistry and Molecular Biology, Thomas Jefferson University, Philadelphia, PA, USA.
S BarndtDepartment of Biochemistry and Molecular Biology, Thomas Jefferson University, Philadelphia, PA, USA.ORCID http://orcid.org/0000-0002-5644-8598
A R Monte Carlo IiiDepartment of Biochemistry and Molecular Biology, Thomas Jefferson University, Philadelphia, PA, USA.ORCID http://orcid.org/0000-0002-9472-3271
C-F D HouDepartment of Biochemistry and Molecular Biology, Thomas Jefferson University, Philadelphia, PA, USA.ORCID http://orcid.org/0000-0002-1820-9588
R YangDepartment of Molecular Biology, Princeton University, Princeton, NJ, USA.
S StrockDepartment of Biochemistry and Molecular Biology, Thomas Jefferson University, Philadelphia, PA, USA.
A PluciennikDepartment of Biochemistry and Molecular Biology, Thomas Jefferson University, Philadelphia, PA, USA. anna.pluciennik@jefferson.edu.ORCID http://orcid.org/0000-0003-4868-6024

Funding

WORK ORDER 126643 B539 EXPAND IC SUITE75N91019D00024 · NIAID · LEIDOS BIOMEDICAL RESEARCH, INC. · PI BRISCOE, LYNN · 2019 to 2025
$3932.6M
A New Cryo-Transmission Electron Microscope at Thomas Jefferson UniversityS10OD030457 · OD · THOMAS JEFFERSON UNIVERSITY · PI CINGOLANI, GINO · 2022 to 2022
$2.0M
Molecular mechanisms of triplet repeat instability in Huntington's diseaseR01NS118082 · NINDS · THOMAS JEFFERSON UNIVERSITY · PI PLUCIENNIK, ANNA · 2021 to 2025
$1.9M
Crosstalk between DNA repair pathways in repeat instabilityR01GM144553 · NIGMS · THOMAS JEFFERSON UNIVERSITY · PI Anna Pluciennik · 2023 to 2026
$1.4M
NCI NIH HHS 75N91019D00024NIGMS NIH HHS R01 GM144553NIH HHS S10 OD030457NINDS NIH HHS R01 NS118082
6 · The paper itself

Abstract

FAN1 is a DNA dependent nuclease whose proper function is essential for maintaining human health. For example, a genetic variant in FAN1, Arg507 to His hastens onset of Huntington's disease, a repeat expansion disorder for which there is no cure. How the Arg507His mutation affects FAN1 structure and enzymatic function is unknown. Using cryo-EM and biochemistry, we have discovered that FAN1 arginine 507 is critical for its interaction with PCNA, and mutation of Arg507 to His attenuates assembly of the FAN1-PCNA complex on a disease-relevant extrahelical DNA extrusions formed within DNA repeats. This mutation concomitantly abolishes PCNA-FAN1-dependent cleavage of such extrusions, thus unraveling the molecular basis for a specific mutation in FAN1 that dramatically hastens the onset of Huntington's disease. These results underscore the importance of PCNA to the genome stabilizing function of FAN1.

Indexed as

DNA RepairEndodeoxyribonucleasesExodeoxyribonucleasesProliferating Cell Nuclear AntigenArginineCryoelectron MicroscopyDNAHumansHuntington DiseaseMultifunctional EnzymesMutationProtein BindingArginineDNAEndodeoxyribonucleasesExodeoxyribonucleasesFAN1 protein, humanMultifunctional EnzymesPCNA protein, humanProliferating Cell Nuclear Antigen

Identifiers

PMID40368897
PMCPMC12078661

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.