Evidence map›Paper›PMID 40368591›Full record

Observational studyAnnals of clinical and translational neurology2025

HPDL Variant Type Correlates With Clinical Disease Onset and Severity.

Eun Hye Lee, Olivia Kim-Mcmanus, Jennifer H Yang, Richard Haas, Maha S Zaki, Ghada M H Abdel-Salam, Yuji Nakamura, Mohamed S Abdel-Hamind, Darius Ebrahimi-Fakhari, Julian E Alecu and 10 more

Erratum issued Registry-linked trialAbstract readObservational Study
In one paragraph

Observational study in Annals of clinical and translational neurology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. It is linked to trial NCT05848271 (A Patient Registry and Natural History Study of Patients with Biallelic HPDL Mutations), which is not on this map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT05848271 recruitingnot on this map

A Patient Registry and Natural History Study of Patients with Biallelic HPDL Mutations

TypeobservationalSponsorUniversity of California, San DiegoRan2023 to 2027Enrolled50ConditionsMitochondrial Encephalomyopathies, Hereditary Spastic Paraplegia, Spastic Paraplegia, White Matter DiseaseArmsPatient Registry, Dry blood spots sampling
3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

20 authors.

Eun Hye LeeRady Children's Institute for Genomic Medicine, San Diego, California, USA.ORCID 0000-0002-8903-8528
Olivia Kim-McmanusDepartment of Neurosciences and Pediatrics, University of California, San Diego, California, USA.ORCID 0000-0002-4785-7795
Jennifer H YangDepartment of Neurosciences and Pediatrics, University of California, San Diego, California, USA.
Richard HaasDepartment of Neurosciences and Pediatrics, University of California, San Diego, California, USA.
Maha S ZakiHuman Genetics and Genome Research Division, Clinical Genetics Department, National Research Centre, Cairo, Egypt.
Ghada M H Abdel-SalamHuman Genetics and Genome Research Division, Clinical Genetics Department, National Research Centre, Cairo, Egypt.
Yuji NakamuraRady Children's Institute for Genomic Medicine, San Diego, California, USA.
Mohamed S Abdel-HamindHuman Genetics and Genome Research Division, Medical Molecular Genetic Department, National Research Centre, Cairo, Egypt.
Darius Ebrahimi-FakhariDepartment of Neurology, F.M. Kirby Neurobiology Center, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA.ORCID 0000-0002-0026-4714
Julian E AlecuDepartment of Neurology, F.M. Kirby Neurobiology Center, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA.
Nicola Brunetti-PierriTelethon Institute of Genetics and Medicine, Naples, Italy.
Varunvenkat M SrinivasanDepartment of Pediatric Neurology, Indira Gandhi Institute of Child Health, Bangalore, India.
Vykuntaraju K GowdaDepartment of Pediatric Neurology, Indira Gandhi Institute of Child Health, Bangalore, India.
Stephanie GrossDepartment of Pediatric Neurology, Social Pediatrics and Epileptology, Center for Pediatrics and Adolescent Medicine at the University Hospital Giessen and Marburg GmbH, Marburg, Germany.
Yasemin AlanayPediatric Genetics Unit, Department of Pediatrics, School of Medicine, Acibadem Mehmet Ali Aydinlar University, Istanbul, Turkey.
Paria Najarzadeh TotbatiPediatric Genetics Unit, Department of Pediatrics, School of Medicine, Acibadem Mehmet Ali Aydinlar University, Istanbul, Turkey.
Manya YadavilliRady Children's Institute for Genomic Medicine, San Diego, California, USA.
Liana FriedmanRady Children's Institute for Genomic Medicine, San Diego, California, USA.
Naomi Meave OjedaRady Children's Institute for Genomic Medicine, San Diego, California, USA.
Joseph G GleesonRady Children's Institute for Genomic Medicine, San Diego, California, USA.ORCID 0000-0002-0889-9220

Funding

Child Neurologist Career Development Program (CNCDP)K12NS098482 · NINDS · HUGO W. MOSER RES INST KENNEDY KRIEGER · PI SCHLAGGAR, BRADLEY L · 2016 to 2025
$26.2M
Molecular Characterization of Pontocerebellar HypoplasiaR01NS098004 · NINDS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI JOSEPH G GLEESON · 2016 to 2026
$4.6M
NINDS NIH HHS K12 NS098482NINDS NIH HHS L40 NS139363NINDS NIH HHS R01 NS098004
6 · The paper itself

Abstract

objectiveRecently, a mitochondrial encephalopathy due to biallelic HPDL variants was described, associated with a broad range of clinical manifestations ranging from severe, infantile-onset neurodegeneration to adolescence-onset hereditary spastic paraplegia. HPDL converts 4-hydroxyphenylpyruvate acid (4-HPPA) into 4-hydroxymandelate (4-HMA), necessary for the synthesis of the mitochondrial electron transporter CoQ10. This suggests a possible bypass of the metabolic block by 4-HMA treatment; however, genotype-phenotype correlations are lacking.

methodsWe established an HPDL Patient Registry to prepare for a future clinical trial. Here we report the clinical features of 13 enrolled participants and compare them with 86 previously reported patients. We establish three major clinical classes: severe, intermediate, and mild, presenting onset in early infancy, childhood, and adolescence, respectively. The biallelic genotypes were classified into truncating/truncating, truncating/missense, and missense/missense variants, mapped onto the predicted 3D protein structure, and correlated with severity.

resultsPatients with biallelic truncating variants presented with severe phenotypes and earlier ages of onset. Missense variants were often associated with milder phenotypes, except those with variants predominantly located in or near the VOC2 domain containing iron-binding sites or the C-terminus, which had more severe phenotypes. In addition, p.Met1? variants were also correlated with more severe phenotypes.

interpretationThis study demonstrates the correlation of age of onset and disease severity with genotype for HPDL-related conditions. Patients with truncating variants and specific missense variants correlated with severe, early-onset features, whereas the presence of at least one missense variant located outside of the iron-binding sites correlated with milder presentations.

trial registrationClinicaltrials.gov HPDL registry: https://clinicaltrials.gov/study/NCT05848271.

Indexed as

Iron-Binding ProteinsMitochondrial EncephalomyopathiesAdolescentAge of OnsetChildChild, PreschoolFemaleGenetic Association StudiesHumansInfantMalePhenotypeRegistriesSeverity of Illness IndexHPDL protein, humanIron-Binding Proteins4‐hydroxyphenylpyruvate dioxygenase‐like proteinencephalopathyhereditary spastic paraplegiaHPDLmitochondria

Identifiers

PMID40368591
PMCPMC12257120

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.