Evidence map›Paper›PMID 40366596›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2025

Quantitative Analysis of Tomato Flower Pedicel Abscission and Single-Cell Transcriptome Analysis.

Tao Xu, Lina Cheng, Ruizhen Li, Cai-Zhong Jiang

Abstract read
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In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Tao XuCollege of Horticulture, Shenyang Agricultural University, Shenyang, China. syauxutao@syau.edu.cn.
Lina ChengCollege of Horticulture, Shenyang Agricultural University, Shenyang, China.
Ruizhen LiCollege of Horticulture, Shenyang Agricultural University, Shenyang, China.
Cai-Zhong JiangCrops Pathology and Genetic Research Unit, United States Department of Agriculture Agricultural Research Service, Davis, CA, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plant organ abscission is a highly organized biological process in response to developmental and environmental cues. The understanding of the regulation of abscission is of great importance for the improvement of crop productivity and quality. The abscission process can be quantitatively analyzed by investigating the abscission of the tomato flower pedicel of different genotypes at a specific period. Single-cell transcriptomics is a novel approach to dissect the characteristics of pedicel abscission zone cells. In this chapter, we provide a detailed description of an abscission assay of flower pedicel explants and the method of single-cell transcriptome sequencing, including sample preparation, data determination, and analysis.

Indexed as

FlowersGene Expression ProfilingSingle-Cell AnalysisSolanum lycopersicumTranscriptomeGene Expression Regulation, PlantSingle-Cell Gene Expression AnalysisAbscissionSingle-cell transcriptomeTomato flower pedicel

Identifiers

What OpenQuestion holds

Textmetadata
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.