Evidence map›Paper›PMID 40366167›Full record

ArticleJournal of clinical microbiology2025

Assessing the sequencing success and analytical specificity of a targeted amplicon deep sequencing workflow for genotyping the foodborne parasite

Anna C Peterson, David Jacobson, Travis Richins, Joel Barratt, Yvonne Qvarnstrom

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Journal of clinical microbiology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Anna C PetersonCenters for Disease Control and Prevention, National Center for Emerging and Zoonotic Infectious Diseases, Division of Parasitic Diseases and Malaria, Laboratory Science and Diagnostics Branch, Atlanta, Georgia, USA.ORCID 0000-0001-9717-7651
David JacobsonCenters for Disease Control and Prevention, National Center for Emerging and Zoonotic Infectious Diseases, Division of Parasitic Diseases and Malaria, Laboratory Science and Diagnostics Branch, Atlanta, Georgia, USA.
Travis RichinsCenters for Disease Control and Prevention, National Center for Emerging and Zoonotic Infectious Diseases, Division of Parasitic Diseases and Malaria, Laboratory Science and Diagnostics Branch, Atlanta, Georgia, USA.ORCID 0000-0002-0957-8058
Joel BarrattCenters for Disease Control and Prevention, National Center for Emerging and Zoonotic Infectious Diseases, Division of Parasitic Diseases and Malaria, Laboratory Science and Diagnostics Branch, Atlanta, Georgia, USA.ORCID 0000-0001-8711-2408
Yvonne QvarnstromCenters for Disease Control and Prevention, National Center for Emerging and Zoonotic Infectious Diseases, Division of Parasitic Diseases and Malaria, Laboratory Science and Diagnostics Branch, Atlanta, Georgia, USA.ORCID 0000-0002-9466-6414

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Epidemiological investigations of the foodborne parasitic illness cyclosporiasis can be aided by molecular techniques that enable the identification of genetically related clusters of

Indexed as

CyclosporaCyclosporiasisFoodborne DiseasesGenotyping TechniquesHigh-Throughput Nucleotide SequencingFecesGenotypeHumansSensitivity and SpecificityWorkflowcyclosporiasisfoodborne illnessmolecular epidemiologyparasitology

Identifiers

PMID40366167
PMCPMC12153321

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.