Evidence map›Paper›PMID 40366143›Full record

ArticleJournal of bacteriology2025

Community living causes changes in metabolic behavior and is permitted by specific growth conditions in two bacterial co-culture systems.

Elizabeth Ellis, Sam Fulte, Skyler Boylan, Alaina Flory, Katherine Paine, Sophia Lopez, Grace Allen, Kanwar Warya, Javier Ortiz-Merino, Sadie Blacketer and 7 more

Abstract read
In one paragraph

Article in Journal of bacteriology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Elizabeth Ellis *Department of Biology, William Jewell College, Liberty, Missouri, USA.
Sam Fulte *Department of Biology, William Jewell College, Liberty, Missouri, USA.ORCID 0009-0008-8206-2948
Skyler BoylanDepartment of Biology, William Jewell College, Liberty, Missouri, USA.
Alaina FloryDepartment of Biology, William Jewell College, Liberty, Missouri, USA.
Katherine PaineDepartment of Biology, William Jewell College, Liberty, Missouri, USA.
Sophia LopezDepartment of Biology, William Jewell College, Liberty, Missouri, USA.
Grace AllenDepartment of Biology, William Jewell College, Liberty, Missouri, USA.
Kanwar WaryaDepartment of Biology, William Jewell College, Liberty, Missouri, USA.
Javier Ortiz-MerinoDepartment of Biology, William Jewell College, Liberty, Missouri, USA.
Sadie BlacketerDepartment of Biology, William Jewell College, Liberty, Missouri, USA.
Samantha ThompsonDepartment of Biology, William Jewell College, Liberty, Missouri, USA.
Sierra SanchezDepartment of Biology, William Jewell College, Liberty, Missouri, USA.
Kayla BurdetteDepartment of Biology, William Jewell College, Liberty, Missouri, USA.
Audrey DuchschererDepartment of Biology, William Jewell College, Liberty, Missouri, USA.
Nick PinkhamDepartment of Microbiology and Cell Biology, Montana State University, Bozeman, Montana, USA.
Joseph D ShihDepartment of Biology, William Jewell College, Liberty, Missouri, USA.
Lilah Rahn-LeeDepartment of Biology, William Jewell College, Liberty, Missouri, USA.ORCID 0000-0002-5332-4477

Funding

National Science Foundation 2031102
6 · The paper itself

Abstract

Although bacteria exist in complex microbial communities in the environment, their features and behavior are most often studied in monoculture. While environmental enrichments or complex co-cultures with tens or hundreds of members might more accurately represent the natural communities of bacteria, we sought to create simple pairs of organisms to learn what conditions create successful co-culture and how bacteria change transcriptionally when a partner species is present. We grew two pairs of organisms in co-culture, IMPORTANCE: In 1882, Robert Koch and Fanny Hesse developed the agar plate, which enabled microbiologists to separate individual microbial cells from each other and create monocultures of a single strain of bacteria. This powerful tool has been used in the almost 150 years since to develop a robust understanding of how bacterial cells are structured, how they manage and process their information, and how they respond to the environment to produce behaviors that match their circumstances. We were curious about how the behavior of bacteria, as measured by their gene expression, changes between well-studied monoculture conditions and co-culture. We found that only specific growth conditions permit co-culture and that bacteria change their metabolic strategies in the presence of a partner.

Indexed as

BacteriaBacteroides thetaiotaomicronEscherichia coliLacticaseibacillus rhamnosusPseudomonas aeruginosaCoculture TechniquesCulture MediaGene Expression Regulation, BacterialCulture Mediaco-culturemicrobial communitiestranscriptomics

Identifiers

PMID40366143
PMCPMC12186488

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.