Evidence map›Paper›PMID 40365017›Full record

ArticleFrontiers in cell and developmental biology2025

Systematic optimization of prime editing for enhanced efficiency and versatility in genome engineering across diverse cell types.

Huiling Mu, Yeyi Liu, Yijia Chi, Fei Wang, Shuting Meng, Yi Zhang, Xunting Wang, Dongxin Zhao

Abstract read
In one paragraph

Article in Frontiers in cell and developmental biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Huiling Mu *School of Chinese Materia Medica, Nanjing University of Chinese Medicine, Nanjing, China.
Yeyi Liu *Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai, China.
Yijia ChiShanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai, China.
Fei WangShanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai, China.
Shuting MengShanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai, China.
Yi ZhangSchool of Chinese Materia Medica, Nanjing University of Chinese Medicine, Nanjing, China.
Xunting WangSchool of Chinese Materia Medica, Nanjing University of Chinese Medicine, Nanjing, China.
Dongxin ZhaoSchool of Chinese Materia Medica, Nanjing University of Chinese Medicine, Nanjing, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Prime editing offers remarkable versatility in genome editing, but its efficiency remains a major bottleneck. While continuous optimization of the prime editing enzymes and guide RNAs (pegRNAs) has improved editing outcomes, the method of delivery also plays a crucial role in overall performance. To maximize prime editing efficiency, we implemented a series of systematic optimizations, achieving up to 80% editing efficiency across multiple loci and cell lines. Beyond integrating the latest advancements in prime editing, our approach combined stable genomic integration of prime editors via the piggyBac transposon system, selection of integrated single clones, the use of an enhanced promoter, and lentiviral delivery of pegRNAs, ensuring robust, ubiquitous, and sustained expression of both prime editors and pegRNAs. To further assess its efficacy in challenging cell types, we validated our optimized system in human pluripotent stem cells (hPSCs) in both primed and naïve states, achieving substantial editing efficiencies of up to 50%. Collectively, our optimized prime editing strategy provides a highly efficient and versatile framework for genome engineering

Indexed as

genome engineeringpiggyBac transposon systempluripotent stem cellsprime editingsustained expression

Identifiers

PMID40365017
PMCPMC12069386

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.