Evidence map›Paper›PMID 40360674›Full record

ArticleScientific reports2025

Effect of heterozygous deletions on phenotypic changes and dosage compensation in Arabidopsis thaliana.

Takuya Ikoma, Ryo Nishijima, Miho Ikeda, Kotaro Ishii, Asanga Deshappriya Nagalla, Tomoko Abe, Yusuke Kazama

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Takuya Ikoma *Graduate School of Bioscience and Biotechnology, Fukui Prefectural University, 4-1-1 Kenjojima, Matsuoka, Eiheiji-cho, Fukui, 910-1195, Japan.
Ryo Nishijima *Graduate School of Bioscience and Biotechnology, Fukui Prefectural University, 4-1-1 Kenjojima, Matsuoka, Eiheiji-cho, Fukui, 910-1195, Japan.
Miho IkedaGraduate School of Bioscience and Biotechnology, Fukui Prefectural University, 4-1-1 Kenjojima, Matsuoka, Eiheiji-cho, Fukui, 910-1195, Japan.
Kotaro IshiiDepartment of Radiation Measurement and Dose Assessment, Institute for Radiological Science, National Institutes for Quantum Science and Technology, 4-9-1 Anagawa, Inage-ku, Chiba, Chiba 263-8555, Japan.
Asanga Deshappriya NagallaRIKEN Nishina Center, 2-1 Hirosawa, Wako, 351-0198, Saitama, Japan.
Tomoko AbeRIKEN Nishina Center, 2-1 Hirosawa, Wako, 351-0198, Saitama, Japan.
Yusuke KazamaGraduate School of Bioscience and Biotechnology, Fukui Prefectural University, 4-1-1 Kenjojima, Matsuoka, Eiheiji-cho, Fukui, 910-1195, Japan. ykaze@fpu.ac.jp.

Funding

Japan Society for the Promotion of Science JP20H03297Japan Society for the Promotion of Science JP23K14234
6 · The paper itself

Abstract

Heterozygous deletions, which include a large number of genes, are often caused by the induction of mutations. The induction of gene dosage compensation should be considered when assessing the effects of heterozygous deletions on phenotypic changes. This mechanism is known to balance the expression levels of genes with different copy numbers in sex chromosomes, but it is also known to operate in autosomes. In the present study, 12 Arabidopsis thaliana BC

Indexed as

ArabidopsisDosage Compensation, GeneticGene DeletionSequence DeletionGene Expression Regulation, PlantHeterozygotePhenotypeArabidopsis thalianaDosage compensationHeavy-ion beamHeterozygous deletion

Identifiers

PMID40360674
PMCPMC12075518

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.