Evidence map›Paper›PMID 40360518›Full record

ArticleNature communications2025

Structural basis of phosphorylation-independent nuclear import of CIRBP by TNPO3.

Qishun Zhou, Theo Sagmeister, Saskia Hutten, Benjamin Bourgeois, Tea Pavkov-Keller, Dorothee Dormann, Tobias Madl

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Qishun ZhouResearch Unit Integrative Structural Biology, Medicinal Chemistry, Otto Loewi Research Center, Medical University of Graz, Graz, Austria.ORCID http://orcid.org/0000-0001-6181-0638
Theo SagmeisterInstitute of Molecular Biosciences, University of Graz, Graz, Austria.ORCID http://orcid.org/0000-0002-6703-5510
Saskia HuttenJohannes Gutenberg Universität Mainz, Institute of Molecular Physiology, Mainz, Germany.
Benjamin BourgeoisResearch Unit Integrative Structural Biology, Medicinal Chemistry, Otto Loewi Research Center, Medical University of Graz, Graz, Austria.
Tea Pavkov-KellerInstitute of Molecular Biosciences, University of Graz, Graz, Austria.ORCID http://orcid.org/0000-0001-7871-6680
Dorothee DormannJohannes Gutenberg Universität Mainz, Institute of Molecular Physiology, Mainz, Germany.ORCID http://orcid.org/0000-0002-9260-2775
Tobias MadlResearch Unit Integrative Structural Biology, Medicinal Chemistry, Otto Loewi Research Center, Medical University of Graz, Graz, Austria. tobias.madl@medunigraz.at.ORCID http://orcid.org/0000-0002-9725-5231

Funding

Austrian Science Fund (Fonds zur Förderung der Wissenschaftlichen Forschung) 10.55776/DOC130Austrian Science Fund (Fonds zur Förderung der Wissenschaftlichen Forschung) 10.55776/I3792Austrian Science Fund (Fonds zur Förderung der Wissenschaftlichen Forschung) 10.55776/P28854Austrian Science Fund (Fonds zur Förderung der Wissenschaftlichen Forschung) 10.55776/W1226Österreichische Forschungsförderungsgesellschaft (Austrian Research Promotion Agency) 864690Österreichische Forschungsförderungsgesellschaft (Austrian Research Promotion Agency) 870454Österreichische Forschungsförderungsgesellschaft (Austrian Research Promotion Agency) 912192
6 · The paper itself

Abstract

Transportin 3 (TNPO3) is a nuclear import receptor known for its broad substrate specificity, often recognizing arginine-serine (SR/RS) repeat-rich nuclear localization signals (NLS) in SRSF proteins. While serine phosphorylation or glutamate presence has been associated with these NLSs, recent proteomic studies identified TNPO3 cargoes lacking SR/RS repeats. One such example is the cold-inducible RNA-binding protein (CIRBP), which contains a non-classical RSY-NLS. Using X-ray crystallography, here we investigate the TNPO3-CIRBP interaction and find that tyrosines within the RSY-NLS play a key role in binding, independent of phosphorylation. Surprisingly, serine and tyrosine phosphorylation in CIRBP's NLS inhibits TNPO3 binding, suggesting a regulatory mechanism for nuclear import. Our study reveals a non-conventional nuclear import mechanism mediated by TNPO3, which may extend to other known or yet undiscovered TNPO3 cargoes.

Indexed as

beta KaryopherinsCell NucleusRNA-Binding ProteinsActive Transport, Cell NucleusCrystallography, X-RayHumansModels, MolecularNuclear Localization SignalsPhosphorylationProtein BindingTyrosinebeta KaryopherinsNuclear Localization SignalsRNA-Binding ProteinsTyrosine

Identifiers

PMID40360518
PMCPMC12075686

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.