Evidence map›Paper›PMID 40360498›Full record

ArticleNature communications2025

Alternatively spliced mini-exon B in PTPδ regulates excitatory synapses through cell-type-specific trans-synaptic PTPδ-IL1RAP interaction.

Seoyeong Kim, Jae Jin Shin, Muwon Kang, Yeji Yang, Yi Sul Cho, Hyojung Paik, Jimin Kim, Yunho Yi, Suho Lee, Hei Yeun Koo and 4 more

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Seoyeong Kim *Department of Biological Sciences, Korea Advanced Institute for Science and Technology (KAIST), Daejeon, 34141, Korea.ORCID http://orcid.org/0000-0002-0231-6055
Jae Jin Shin *Center for Synaptic Brain Dysfunctions, Institute for Basic Science (IBS), Daejeon, 34141, Korea.ORCID http://orcid.org/0000-0003-3644-2516
Muwon Kang *Department of Biological Sciences, Korea Advanced Institute for Science and Technology (KAIST), Daejeon, 34141, Korea.
Yeji YangDepartment of Biological Sciences, Korea Advanced Institute for Science and Technology (KAIST), Daejeon, 34141, Korea.ORCID http://orcid.org/0000-0002-2994-4510
Yi Sul ChoDepartment of Anatomy and Neurobiology, School of Dentistry, Kyungpook National University, Daegu, 41940, Korea.ORCID http://orcid.org/0000-0002-6310-8655
Hyojung PaikCenter for Biomedical Computing, Korea Institute of Science and Technology Information (KISTI), Daejeon, 34141, Korea.
Jimin KimCenter for Biomedical Computing, Korea Institute of Science and Technology Information (KISTI), Daejeon, 34141, Korea.ORCID http://orcid.org/0000-0002-8256-9801
Yunho YiDepartment of Biological Sciences, Korea Advanced Institute for Science and Technology (KAIST), Daejeon, 34141, Korea.ORCID http://orcid.org/0009-0000-0594-8675
Suho LeeCenter for Synaptic Brain Dysfunctions, Institute for Basic Science (IBS), Daejeon, 34141, Korea.ORCID http://orcid.org/0000-0002-5956-9985
Hei Yeun KooDepartment of Anatomy, Yonsei University College of Medicine, Seoul, 03722, Korea.ORCID http://orcid.org/0000-0002-6131-1203
Jinwoong BokDepartment of Anatomy, Yonsei University College of Medicine, Seoul, 03722, Korea.ORCID http://orcid.org/0000-0003-1958-1872
Yong Chul BaeDepartment of Anatomy and Neurobiology, School of Dentistry, Kyungpook National University, Daegu, 41940, Korea.ORCID http://orcid.org/0000-0002-7618-418X
Jin Young KimDigital Omics Research Center, Korea Basic Science Institute (KBSI), Ochang, 28119, Korea.ORCID http://orcid.org/0000-0002-0656-1269
Eunjoon KimDepartment of Biological Sciences, Korea Advanced Institute for Science and Technology (KAIST), Daejeon, 34141, Korea. kime@kaist.ac.kr.ORCID http://orcid.org/0000-0001-5518-6584

Funding

Institute for Basic Science (IBS) IBS-R002-D1
6 · The paper itself

Abstract

PTPδ, encoded by PTPRD, is implicated in various neurological, psychiatric, and neurodevelopmental disorders, but the underlying mechanisms remain unclear. PTPδ trans-synaptically interacts with multiple postsynaptic adhesion molecules, which involves its extracellular alternatively spliced mini-exons, meA and meB. While PTPδ-meA functions have been studied in vivo, PTPδ-meB has not been studied. Here, we report that, unlike homozygous PTPδ-meA-mutant mice, homozygous PTPδ-meB-mutant (Ptprd-meB

Indexed as

Alternative SplicingExonsReceptor-Like Protein Tyrosine Phosphatases, Class 2SynapsesAnimalsBehavior, AnimalDentate GyrusFemaleInterneuronsMaleMiceMice, Inbred C57BLMice, KnockoutSynaptic TransmissionReceptor-Like Protein Tyrosine Phosphatases, Class 2

Identifiers

PMID40360498
PMCPMC12075705

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.