Evidence map›Paper›PMID 40351404›Full record

ArticlePHAGE (New Rochelle, N.Y.)2025

Degradation of Preformed Gram-Positive and Gram-Negative Bacterial Biofilms Using Disintegrated and Intact Phages.

Sahd Ali, Abdulkerim Karaynir, Hanife Salih Doğan, Ramesh Nachimuthu, Kingsley Badu, Bülent Bozdoğan

Abstract read
In one paragraph

Article in PHAGE (New Rochelle, N.Y.), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Characterization of a novel phage-plasmid vB_EcoM_ED targeting multidrug-resistant Escherichia coli isolates.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2026
    Article
  2. Application of three-dimensional bacteriophage cocktail biogel on infected burn wounds in rats.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2025
    Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Sahd AliRecombinant DNA and Protein Research Center (REDPROM), Aydin Adnan Menderes University, Aydin, Türkiye.
Abdulkerim KaraynirRecombinant DNA and Protein Research Center (REDPROM), Aydin Adnan Menderes University, Aydin, Türkiye.
Hanife Salih DoğanRecombinant DNA and Protein Research Center (REDPROM), Aydin Adnan Menderes University, Aydin, Türkiye.ORCID https://orcid.org/0000-0003-2141-0669
Ramesh NachimuthuAntibiotic Resistance and Phage Therapy Laboratory, SBST, Vellore Institute of Technology, Vellore, India.
Kingsley BaduDepartment of Theoretical and Applied Biology, Kwame Nkrumah University of Science and Technology, Kumasi, Ghana.
Bülent BozdoğanRecombinant DNA and Protein Research Center (REDPROM), Aydin Adnan Menderes University, Aydin, Türkiye.ORCID https://orcid.org/0000-0003-2469-9728

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: Biofilm is a major challenge across several sectors and contributes to serious risks to public health. This study aimed to evaluate the antibiofilm efficacy of disintegrated phages, whose lytic activities have been eliminated, against bacterial biofilms. Methods: A total of seven lytic phages were disintegrated by sonication and confirmed to have completely lost their lytic activities by the spot test. Subsequently, both the disintegrated and intact phages were tested on the biofilms produced by five different biofilm-producing bacteria. The effects of heat and proteinase K on the ability of disintegrated phages to disrupt biofilms were determined. Moreover, the structural proteins released after the disintegration of phages were screened for their presence of lipase, amylase, protease, and DNase activities. Genome analysis of all the seven phages were screened for the presence of genes encoding proteins with enzymatic activities. Results: The disintegrated phages showed more effectiveness in degrading the bacterial biofilm when compared with intact phages. The amylase test results were positive for all the seven disintegrated phages tested, confirming the presence of starch-degrading enzymes. Genomic analysis of five phages revealed the presence of genes encoding transglycosylases, amidases, and glycosaminidases, which could contribute to biofilm degradation. However, only four of these proteins were also structural proteins of phages. Conclusions: Our study demonstrated that disintegrated phages without lytic effects can still possess biofilm degrading ability, probably associated with the enzymatic activities of their structural proteins. This study showed that phages may have activities beyond lytic phage activities exhibited by their structural enzymes.

Indexed as

antibiofilm efficacybacteriophagebiofilmenzymatic activitiesextracellular polymeric substance (EPS)structural proteins

Identifiers

PMID40351404
PMCPMC12059619

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.