Evidence map›Paper›PMID 40348740›Full record

ArticleNature communications2025

Structural basis of TMPRSS11D specificity and autocleavage activation.

Bryan J Fraser, Ryan P Wilson, Sára Ferková, Olzhas Ilyassov, Jackie Lac, Aiping Dong, Yen-Yen Li, Alma Seitova, Yanjun Li, Zahra Hejazi and 8 more

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Identification ofRSC medicinal chemistry · 2026
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Bryan J FraserStructural Genomics Consortium Toronto, Toronto, ON, Canada. Bryanj.fraser@utoronto.ca.ORCID http://orcid.org/0000-0001-6398-106X
Ryan P WilsonStructural Genomics Consortium Toronto, Toronto, ON, Canada.
Sára FerkováDepartment of Pharmacology and Physiology, Faculty of Medicine and Health Sciences, Institut de Pharmacologie de Sherbrooke, Université de Sherbrooke, Sherbrooke, QC, Canada.
Olzhas IlyassovStructural Genomics Consortium Toronto, Toronto, ON, Canada.
Jackie LacStructural Genomics Consortium Toronto, Toronto, ON, Canada.
Aiping DongStructural Genomics Consortium Toronto, Toronto, ON, Canada.
Yen-Yen LiStructural Genomics Consortium Toronto, Toronto, ON, Canada.ORCID http://orcid.org/0009-0002-5733-598X
Alma SeitovaStructural Genomics Consortium Toronto, Toronto, ON, Canada.
Yanjun LiStructural Genomics Consortium Toronto, Toronto, ON, Canada.ORCID http://orcid.org/0000-0002-9512-5265
Zahra HejaziStructural Genomics Consortium Toronto, Toronto, ON, Canada.
Tristan M G KenneyDepartment of Medical Biophysics, University of Toronto, Toronto, ON, Canada.ORCID http://orcid.org/0000-0001-8242-4349
Linda Z PennDepartment of Medical Biophysics, University of Toronto, Toronto, ON, Canada.
Aled EdwardsStructural Genomics Consortium Toronto, Toronto, ON, Canada.ORCID http://orcid.org/0000-0002-4782-6016
Richard LeducDepartment of Pharmacology and Physiology, Faculty of Medicine and Health Sciences, Institut de Pharmacologie de Sherbrooke, Université de Sherbrooke, Sherbrooke, QC, Canada.ORCID http://orcid.org/0000-0001-6854-8003
Pierre-Luc BoudreaultDepartment of Pharmacology and Physiology, Faculty of Medicine and Health Sciences, Institut de Pharmacologie de Sherbrooke, Université de Sherbrooke, Sherbrooke, QC, Canada.ORCID http://orcid.org/0000-0002-2032-7970
Gregg B MorinCanada's Michael Smith Genome Sciences Centre, Vancouver, BC, Canada. gmorin@bcgsc.ca.ORCID http://orcid.org/0000-0001-8949-4374
François BénardBritish Columbia Cancer Research Institute, Vancouver, BC, Canada. fbenard@bccrc.ca.
Cheryl H ArrowsmithStructural Genomics Consortium Toronto, Toronto, ON, Canada. Cheryl.arrowsmith@uhn.ca.ORCID http://orcid.org/0000-0002-4971-3250

Funding

Research Project 1: Coronavirus antiviral lead development and combination testingU19AI171292 · NIAID · UNIV OF NORTH CAROLINA CHAPEL HILL · PI BARIC, RALPH S, WILLSON, TIMOTHY M · 2022 to 2022
$65.5M
NIAID NIH HHS U19 AI171292U.S. Department of Health & Human Services | National Institutes of Health (NIH) 1U19AI171292-01Wellcome Trust
6 · The paper itself

Abstract

Transmembrane Protease, Serine-2 (TMPRSS2) and TMPRSS11D are human proteases that enable SARS-CoV-2 and Influenza A/B virus infections, but their biochemical mechanisms for facilitating viral cell entry remain unclear. We show these proteases spontaneously and efficiently cleave their own zymogen activation motifs, activating their broader protease activity on cellular substrates. We determine TMPRSS11D co-crystal structures with a native and an engineered activation motif, revealing insights into its autocleavage activation and distinct substrate binding cleft features. Leveraging this structural data, we develop nanomolar potency peptidomimetic inhibitors of TMPRSS11D and TMPRSS2. We show that a broad serine protease inhibitor that underwent clinical trials for TMPRSS2-targeted COVID-19 therapy, nafamostat mesylate, was rapidly cleaved by TMPRSS11D and converted to low activity derivatives. In this work, we develop mechanistic insights into human protease viral tropism and highlight both the strengths and limitations of existing human serine protease inhibitors, informing future drug discovery efforts targeting these proteases.

Indexed as

Membrane ProteinsSerine EndopeptidasesBenzamidinesCOVID-19COVID-19 Drug TreatmentCrystallography, X-RayGuanidinesHumansSARS-CoV-2Serine Proteinase InhibitorsSubstrate SpecificityVirus InternalizationBenzamidinesGuanidinesMembrane ProteinsnafamostatSerine EndopeptidasesSerine Proteinase InhibitorsTMPRSS13 protein, humanTMPRSS2 protein, human

Identifiers

PMID40348740
PMCPMC12065894

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.