Evidence map›Paper›PMID 40347502›Full record

ArticleThe Indian journal of medical research2025

Identification & genetic & virological characterisation of a human case of avian influenza A (H9N2) virus from Eastern India.

Agniva Majumdar, Varsha Potdar, Veena Vipat, Shailesh Pawar, Sheetal Jadhav, Manohar Lal Choudhary, Satish Gaikwad, Sachin Keng, Deeksha Tare, Ananya Chatterjee and 7 more

Abstract readCase Reports
In one paragraph

Article in The Indian journal of medical research, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

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2citing papers in PubMed
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1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

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4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Agniva MajumdarRegional Virus Research and Diagnostic Laboratory, ICMR-National Institute for Research in Bacterial Infections (NIRBI), Kolkata, West Bengal, India.
Varsha PotdarInfluenza Group, ICMR-National Institute of Virology, Pune, Maharashtra, India.
Veena VipatInfluenza Group, ICMR-National Institute of Virology, Pune, Maharashtra, India.
Shailesh PawarPolio Virus Group, ICMR National Institute of Virology, Mumbai Unit, Mumbai, Maharashtra, India.
Sheetal JadhavInfluenza Group, ICMR-National Institute of Virology, Pune, Maharashtra, India.
Manohar Lal ChoudharyInfluenza Group, ICMR-National Institute of Virology, Pune, Maharashtra, India.
Satish GaikwadInfluenza Group, ICMR-National Institute of Virology, Pune, Maharashtra, India.
Sachin KengPolio Virus Group, ICMR National Institute of Virology, Mumbai Unit, Mumbai, Maharashtra, India.
Deeksha TarePolio Virus Group, ICMR National Institute of Virology, Mumbai Unit, Mumbai, Maharashtra, India.
Ananya ChatterjeeRegional Virus Research and Diagnostic Laboratory, ICMR-National Institute for Research in Bacterial Infections (NIRBI), Kolkata, West Bengal, India.
Susmita GoswamiRegional Virus Research and Diagnostic Laboratory, ICMR-National Institute for Research in Bacterial Infections (NIRBI), Kolkata, West Bengal, India.
Sutapa HazraRegional Virus Research and Diagnostic Laboratory, ICMR-National Institute for Research in Bacterial Infections (NIRBI), Kolkata, West Bengal, India.
Sumit Dutt BhardwajInfluenza Group, ICMR-National Institute of Virology, Pune, Maharashtra, India.
Neetu VijayDivision of Communicable Diseases, Indian Council of Medical Research, New Delhi, India.
Labanya MukhopadhyayDivision of Communicable Diseases, Indian Council of Medical Research, New Delhi, India.
Shanta DuttaRegional Virus Research and Diagnostic Laboratory, ICMR-National Institute for Research in Bacterial Infections (NIRBI), Kolkata, West Bengal, India.
Nivedita GuptaDivision of Communicable Diseases, Indian Council of Medical Research, New Delhi, India.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background & objectives A three-year-old male child from West Bengal, India, with severe acute respiratory symptoms, was confirmed in the laboratory with LPAI H9N2 virus infection under the Indian Council of Medical Research (ICMR) - Pan India Acute Respiratory Infections (ARI) / Severe Acute Respiratory Infections (SARI) surveillance through the Virus Research and Diagnostic Laboratories network. Methods Common respiratory viruses were detected by real-time PCR, followed by subtyping of Influenza A for seasonal and avian viruses. The identified H9N2 virus was isolated and further characterised, including whole genome sequencing. Antibody response was performed in serum samples of the case and family members. Results Complete genome sequencing revealed a G1 lineage (Middle East B sub-lineage). Bayesian evolutionary analyses of the HA gene of Indian H9N2 poultry strains showed three clusters of multiple introductions at the estimated node age of 1999 based on the Human strain A/India/NIV/1519/2024(H9N2) and the other poultry viruses from India evolved with 4.49 × 10-3 substitutions per site per year. The isolated H9N2 virus showed a high EID50 titre of 108.25/200 µl with avian-type receptor specificity. The antibodies against the H9N2 virus were only detected in the study case and not in close contacts confirming limited human-to-human transmission. The virus was found to be sensitive to neuraminidase inhibitors oseltamivir and zanamivir. Interpretation & conclusions Systematic avian influenza surveillance in both birds and humans is required for the early detection of newly evolved viruses.

Indexed as

Influenza A Virus, H9N2 SubtypeInfluenza, HumanRespiratory Tract InfectionsAnimalsChild, PreschoolGenome, ViralHumansIndiaInfluenza in BirdsMalePhylogenyPoultryWhole Genome SequencingAvian influenzaEastern IndiaH9N2 complete genomehuman influenza A(H9N2)Middle East B sub-lineage

Identifiers

PMID40347502
PMCPMC12066128

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.