Evidence map›Paper›PMID 40343993›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2025

Acute chromatin decompaction stiffens the nucleus as revealed by nanopillar-induced nuclear deformation in cells.

Aninda Mitra, Marie F A Cutiongco, Romina Burla, Yongpeng Zeng, Qin Na, Mengya Kong, Benjamin Vinod, Mui Hoon Nai, Barbara Hübner, Alexander Ludwig and 4 more

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Review
  2. Review
  3. Review
  4. Review
  5. Mechanical regulation of cell memory.Nature structural & molecular biology · 2026
    Review
  6. Review
  7. Article
  8. Review
  9. Article
  10. Reversible acetylation of Hpo regulates the Hippo pathway.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  11. Article
  12. Article
  13. Early dynamics of chromatin decompaction drive nuclear stiffening.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  14. Acute chromatin decompaction stiffens the nucleus as revealed by nanopillar-induced nuclear deformation in cells.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

14 authors.

Aninda Mitra *School of Chemistry, Chemical Engineering and Biotechnology, Nanyang Technological University, Singapore 637457, Singapore.
Marie F A Cutiongco *School of Chemistry, Chemical Engineering and Biotechnology, Nanyang Technological University, Singapore 637457, Singapore.
Romina BurlaDipartimento di Biologia e Biotecnologie, Sapienza-Università di Roma, Roma 00185, Italy.ORCID 0000-0002-5640-4464
Yongpeng ZengSchool of Chemistry, Chemical Engineering and Biotechnology, Nanyang Technological University, Singapore 637457, Singapore.
Qin NaSchool of Chemistry, Chemical Engineering and Biotechnology, Nanyang Technological University, Singapore 637457, Singapore.
Mengya KongSchool of Chemistry, Chemical Engineering and Biotechnology, Nanyang Technological University, Singapore 637457, Singapore.ORCID 0000-0001-6152-8325
Benjamin VinodSchool of Chemistry, Chemical Engineering and Biotechnology, Nanyang Technological University, Singapore 637457, Singapore.
Mui Hoon NaiDepartment of Biomedical Engineering, National University of Singapore, Singapore 117583, Singapore.ORCID 0000-0003-2823-1508
Barbara HübnerSchool of Biological Sciences, Nanyang Technological University, Singapore 637551, Singapore.ORCID 0000-0001-5148-0823
Alexander LudwigSchool of Biological Sciences, Nanyang Technological University, Singapore 637551, Singapore.
Chwee Teck LimDepartment of Biomedical Engineering, National University of Singapore, Singapore 117583, Singapore.ORCID 0000-0003-4019-9782
G V ShivashankarDepartment of Health Sciences and Technology, ETH Zürich, Zürich 8093, Switzerland.
Isabella SaggioDipartimento di Biologia e Biotecnologie, Sapienza-Università di Roma, Roma 00185, Italy.ORCID 0000-0002-9497-7415
Wenting ZhaoSchool of Chemistry, Chemical Engineering and Biotechnology, Nanyang Technological University, Singapore 637457, Singapore.ORCID 0000-0002-6143-5185

Funding

Fondazione AIRC per la ricerca sul cancro ETS (AIRC) IG-24614Ministry of Education - Singapore (MOE) MOE-MOET32020-0001Ministry of Education - Singapore (MOE) RG145/18 RG93/22 RT3/22MOH | National Medical Research Council (NMRC) MOH-001192-01Nanyang Technological University (NTU) Institute for Digital Molecular Analytics and Science fundingNanyang Technological University (NTU) Presidential Postdoctoral FellowshipNanyang Technological University (NTU) Start-Up Grant NTUitive grant NGF-2021-10-026National University of Singapore (NUS) Mechanobiology Institute Seed Grant
6 · The paper itself

Abstract

Chromatin architecture is critical in determining nuclear mechanics. Most studies focus on the mechanical rigidity conferred by chromatin condensation from densely packed heterochromatin, but less is known on how transient chromatin decompaction impinge on nucleus stiffness. Here, we used an array of vertically aligned nanopillars to study nuclear deformability in situ after chromatin decompaction in cells. The nucleus significantly stiffened within 4 h of chromatin decompaction but softened at longer timescales. This acute stiffening of the nucleus was underpinned predominantly by an increase in nucleus volume and nuclear import, and partially by enhanced lamin protein recruitment to the periphery. The coupling between nucleus stiffening and acute chromatin decompaction was observed in low malignancy cancer cell lines (e.g. MCF7, PEO1, A549) but weakened in highly malignant counterparts (e.g. MDA-MB-231, HEYA8, HT1080) due to the capacity to efficiently compact heterochromatin into foci that sustains nucleus deformability required for confined migration. Our work signals how rapid chromatin remodeling is a physiologically relevant pathway to modulate nucleus mechanics and cell migration behavior.

Indexed as

Cell NucleusChromatinChromatin Assembly and DisassemblyCell Line, TumorHeterochromatinHumansChromatinHeterochromatinchromatin decompactionmechanobiologynuclear deformationnuclear laminanuclear stiffness

Identifiers

PMID40343993
PMCPMC12088434

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.