Evidence map›Paper›PMID 40343729›Full record

ArticleJournal of chemical information and modeling2025

Integrating Pharmacokinetics and Quantitative Systems Pharmacology Approaches in Generative Drug Design.

Helle W van den Maagdenberg, Jikke de Mol van Otterloo, J G Coen van Hasselt, Piet H van der Graaf, Gerard J P van Westen

Abstract read
In one paragraph

Article in Journal of chemical information and modeling, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Helle W van den MaagdenbergLeiden Academic Centre of Drug Research, Leiden University, 2333, Leiden, The Netherlands.ORCID 0000-0002-9718-7806
Jikke de Mol van OtterlooLeiden Academic Centre of Drug Research, Leiden University, 2333, Leiden, The Netherlands.
J G Coen van HasseltLeiden Academic Centre of Drug Research, Leiden University, 2333, Leiden, The Netherlands.
Piet H van der GraafLeiden Academic Centre of Drug Research, Leiden University, 2333, Leiden, The Netherlands.
Gerard J P van WestenLeiden Academic Centre of Drug Research, Leiden University, 2333, Leiden, The Netherlands.ORCID 0000-0003-0717-1817

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Integrated understanding of pharmacokinetics (PK) and pharmacodynamics (PD) is a key aspect of successful drug discovery. Yet in generative computational drug design, the focus often lies on optimizing potency. Here we integrate PK property predictions in DrugEx, a generative drug design framework and we explore the generated compounds' PD through simulations with a quantitative systems pharmacology (QSP) model. Quantitative structure-property relationship models were developed to predict molecule PK (clearance, volume of distribution and unbound fraction) and affinity for the Adenosine A

Indexed as

Drug DesignPharmacokineticsHumansQuantitative Structure-Activity RelationshipReceptor, Adenosine A2AReceptor, Adenosine A2A

Identifiers

PMID40343729
PMCPMC12117666

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.