Evidence map›Paper›PMID 40342523›Full record

ArticleJournal of biomedical optics2025

Deep learning segmentation of periarterial and perivenous capillary-free zones in optical coherence tomography angiography.

Mansour Abtahi, Behrouz Ebrahimi, Albert K Dadzie, Mojtaba Rahimi, Srishti Kolla, Yi-Ting Hsieh, Michael J Heiferman, Jennifer I Lim, Xincheng Yao

Abstract read
In one paragraph

Article in Journal of biomedical optics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. OCTA-ReVABiomedical optics express · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Mansour AbtahiUniversity of Illinois Chicago, Department of Biomedical Engineering, Chicago, Illinois, United States.ORCID 0000-0001-7463-9470
Behrouz EbrahimiUniversity of Illinois Chicago, Department of Biomedical Engineering, Chicago, Illinois, United States.ORCID 0000-0003-3390-7330
Albert K DadzieUniversity of Illinois Chicago, Department of Biomedical Engineering, Chicago, Illinois, United States.ORCID 0000-0002-3466-5188
Mojtaba RahimiUniversity of Illinois Chicago, Department of Biomedical Engineering, Chicago, Illinois, United States.ORCID 0000-0001-6593-905X
Srishti KollaUniversity of Illinois Chicago, Department of Ophthalmology and Visual Sciences, Chicago, Illinois, United States.
Yi-Ting HsiehNational Taiwan University Hospital, Department of Ophthalmology, Taipei, Taiwan.
Michael J HeifermanUniversity of Illinois Chicago, Department of Ophthalmology and Visual Sciences, Chicago, Illinois, United States.ORCID 0000-0003-3456-0164
Jennifer I LimUniversity of Illinois Chicago, Department of Ophthalmology and Visual Sciences, Chicago, Illinois, United States.ORCID 0000-0001-7791-6998
Xincheng YaoUniversity of Illinois Chicago, Department of Biomedical Engineering, Chicago, Illinois, United States.ORCID 0000-0002-0356-3242

Funding

Translational Core for Therapeutic and Diagnostic DevelopmentP30EY001792 · NEI · UNIVERSITY OF ILLINOIS AT CHICAGO · PI SHUKLA, DEEPAK · 1985 to 2025
$14.8M
Functional imaging of retinal photoreceptorsR01EY023522 · NEI · UNIVERSITY OF ILLINOIS AT CHICAGO · PI YAO, XINCHENG · 2014 to 2024
$3.5M
Nonmydriatic ultra-widefield fundus photography employing trans-pars-planar illuminationR01EY029673 · NEI · UNIVERSITY OF ILLINOIS AT CHICAGO · PI CHAN, ROBISON VERNON PAUL, YAO, XINCHENG · 2019 to 2022
$1.8M
Differential artery-vein analysis in OCT angiography for objective classification of diabetic retinopathyR01EY030842 · NEI · UNIVERSITY OF ILLINOIS AT CHICAGO · PI LIM, JENNIFER IRENE, YAO, XINCHENG · 2020 to 2023
$1.7M
Functional tomography of neurovascular coupling interactions in healthy and diseased retinasR01EY030101 · NEI · UNIVERSITY OF ILLINOIS AT CHICAGO · PI YAO, XINCHENG · 2019 to 2022
$1.4M
NEI NIH HHS P30 EY001792NEI NIH HHS R01 EY023522NEI NIH HHS R01 EY029673NEI NIH HHS R01 EY030101NEI NIH HHS R01 EY030842
6 · The paper itself

Abstract

Significance: Automated segmentation of periarterial and perivenous capillary-free zones (CFZs) in optical coherence tomography angiography (OCTA) can significantly improve early detection and monitoring of diabetic retinopathy (DR), a leading cause of vision impairment, by identifying subtle microvascular changes. Aim: We aimed to develop and evaluate deep learning models, including convolutional neural networks (CNNs) and vision transformers (ViTs), for precise segmentation of periarterial and perivenous CFZs. Quantitative features derived from the segmented CFZs were assessed as potential biomarkers for DR. Approach: OCTA images from healthy controls, patients with diabetes but no DR (NoDR), and those with mild DR were utilized. Automated CFZ maps were generated using deep learning models such as UNet, UNet++, TransUNet, and Segformer. Quantitative features, including CFZ ratios, counts, and mean sizes, were analyzed to characterize disease progression. Results: UNet++ with EfficientNet-b7 achieved the best performance, with a mean intersection over union of 86.48% and a Dice coefficient of 89.87%. Quantitative analyses revealed significant differences in CFZ metrics between the control, NoDR, and mild DR groups, demonstrating their potential as sensitive biomarkers for early DR detection and monitoring. Conclusions: The study underscores the efficacy of deep learning models in automating CFZ segmentation and introduces quantitative features as biomarkers for DR. These findings support further exploration of CFZ analysis in retinal disease diagnostics and therapeutic monitoring.

Indexed as

Deep LearningDiabetic RetinopathyImage Processing, Computer-AssistedRetinal VesselsTomography, Optical CoherenceCapillariesFemaleHumansImage Interpretation, Computer-AssistedMaleMiddle AgedNeural Networks, Computercapillary-free zonesdeep learningdiabetic retinopathyoptical coherence tomography angiography

Identifiers

PMID40342523
PMCPMC12061543

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.