Evidence map›Paper›PMID 40341832›Full record

ReviewAdvanced science (Weinheim, Baden-Wurttemberg, Germany)2025

Computational Modeling and Experimental Approaches for Understanding the Mechanisms of [FeFe]-Hydrogenase.

Chang-Ah Kim, Jiabin Wu, Jun Zhu, Huaiguang Li, Zhihai Ke

Abstract readReview
In one paragraph

Review in Advanced science (Weinheim, Baden-Wurttemberg, Germany), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Chang-Ah KimSchool of Science and Engineering, Shenzhen Key Laboratory of Innovative Drug Synthesis, The Chinese University of Hong Kong, Shenzhen, Guangdong, 518172, P. R. China.
Jiabin WuSchool of Science and Engineering, Shenzhen Key Laboratory of Innovative Drug Synthesis, The Chinese University of Hong Kong, Shenzhen, Guangdong, 518172, P. R. China.
Jun ZhuSchool of Science and Engineering, Shenzhen Key Laboratory of Innovative Drug Synthesis, The Chinese University of Hong Kong, Shenzhen, Guangdong, 518172, P. R. China.ORCID https://orcid.org/0000-0002-2099-3156
Huaiguang LiSchool of Science and Engineering, Shenzhen Key Laboratory of Innovative Drug Synthesis, The Chinese University of Hong Kong, Shenzhen, Guangdong, 518172, P. R. China.
Zhihai KeSchool of Science and Engineering, Shenzhen Key Laboratory of Innovative Drug Synthesis, The Chinese University of Hong Kong, Shenzhen, Guangdong, 518172, P. R. China.ORCID https://orcid.org/0000-0001-7079-8845

Funding

Innovation and Entrepreneurship Team of Guangdong Provincial Pearl River Talents Program 2019ZT08L101Innovation and Entrepreneurship Team of Guangdong Provincial Pearl River Talents Program 2021ZT090195National Natural Science Foundation of China 22471233Science, Technology and Innovation Commission of Shenzhen Municipality JSGGKQTD20221101115701006Shenzhen Key Laboratory Fund ZDSYS20220507161600001University stability support program of Shenzhen 2023SC0027
6 · The paper itself

Abstract

Learning from nature has emerged as a promising strategy for catalyst development, wherein the remarkable performance of catalysts selected by nature over billions of years of evolution serves as a basis for the creative design of high-performance catalysts. Hydrogenases, with their exceptional catalytic activity in hydrogen oxidation and production, have been employed as prototypes for human learning to achieve better catalyst design. A comprehensive understanding of hydrogenases' structures and catalytic mechanisms is crucial to replicate and exceed their performance. Computational modeling has proven to be a powerful tool for elucidating the reduction chemistry of [FeFe]-hydrogenases. This review overviews recent computational and experimental efforts, focusing on density functional theory (DFT) calculations applied to [FeFe] hydrogenases. It summarizes current knowledge on identifying active sites in [FeFe] hydrogenases and the reaction cycles involved in hydrogen metabolism.

Indexed as

HydrogenaseIron-Sulfur ProteinsCatalysisCatalytic DomainComputer SimulationDensity Functional TheoryHydrogenModels, MolecularOxidation-ReductionHydrogenHydrogenaseiron hydrogenaseIron-Sulfur Proteinscatalyst developmentdensity functional theory calculations[FeFe] hydrogenaseshydrogenasesnature‐inspired design

Identifiers

PMID40341832
PMCPMC12140359

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.