Evidence map›Paper›PMID 40340921›Full record

ArticleBMC research notes2025

Seedling growth rate and root traits in the maize Nested Association Mapping (NAM) panel.

Maya Montoya-Pimolwatana, Tai McClellan Maaz, Michael Kantar, Michael Muszynski, Yuriy Mileyko, Rishi Prasadh, Ishwora Dhungana, Kenneth Kiehl, Abigail H Ana, Alanna Nguyen and 32 more

Abstract read
In one paragraph

Article in BMC research notes, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

42 authors.

Maya Montoya-PimolwatanaDepartment of Tropical Plant and Soil Sciences, University of Hawai'i at Mānoa, Honolulu, HI, USA. mlmp25@hawaii.edu.
Tai McClellan MaazDepartment of Tropical Plant and Soil Sciences, University of Hawai'i at Mānoa, Honolulu, HI, USA. tai.mc.maaz@hawaii.edu.
Michael KantarDepartment of Tropical Plant and Soil Sciences, University of Hawai'i at Mānoa, Honolulu, HI, USA. mbkantar@hawaii.edu.
Michael MuszynskiDepartment of Tropical Plant and Soil Sciences, University of Hawai'i at Mānoa, Honolulu, HI, USA.
Yuriy MileykoDepartment of Mathematics, University of Hawai'i at Mānoa, Honolulu, HI, USA.
Rishi PrasadhDepartment of Tropical Plant and Soil Sciences, University of Hawai'i at Mānoa, Honolulu, HI, USA.
Ishwora DhunganaDepartment of Tropical Plant and Soil Sciences, University of Hawai'i at Mānoa, Honolulu, HI, USA.
Kenneth KiehlDepartment of Tropical Plant and Soil Sciences, University of Hawai'i at Mānoa, Honolulu, HI, USA.
Abigail H AnaDepartment of Tropical Plant and Soil Sciences, University of Hawai'i at Mānoa, Honolulu, HI, USA.
Alanna NguyenDepartment of Tropical Plant and Soil Sciences, University of Hawai'i at Mānoa, Honolulu, HI, USA.
Alycia TausagaDepartment of Tropical Plant and Soil Sciences, University of Hawai'i at Mānoa, Honolulu, HI, USA.
Amanda GodfreyDepartment of Tropical Plant and Soil Sciences, University of Hawai'i at Mānoa, Honolulu, HI, USA.
Amanda K NittaDepartment of Tropical Plant and Soil Sciences, University of Hawai'i at Mānoa, Honolulu, HI, USA.
Bryceson TugadeDepartment of Tropical Plant and Soil Sciences, University of Hawai'i at Mānoa, Honolulu, HI, USA.
D JadenYamagata-SantosDepartment of Tropical Plant and Soil Sciences, University of Hawai'i at Mānoa, Honolulu, HI, USA.
Elizabeth SwantekDepartment of Tropical Plant and Soil Sciences, University of Hawai'i at Mānoa, Honolulu, HI, USA.
Ethan S MorrellDepartment of Tropical Plant and Soil Sciences, University of Hawai'i at Mānoa, Honolulu, HI, USA.
G'Voni KalaiwaaDepartment of Tropical Plant and Soil Sciences, University of Hawai'i at Mānoa, Honolulu, HI, USA.
Germaine Lindsay JuanDepartment of Tropical Plant and Soil Sciences, University of Hawai'i at Mānoa, Honolulu, HI, USA.
Gunnar LarsenDepartment of Tropical Plant and Soil Sciences, University of Hawai'i at Mānoa, Honolulu, HI, USA.
India Kawelolani ChingDepartment of Tropical Plant and Soil Sciences, University of Hawai'i at Mānoa, Honolulu, HI, USA.
Jesse Mikasobe-KealiinohomokuDepartment of Tropical Plant and Soil Sciences, University of Hawai'i at Mānoa, Honolulu, HI, USA.
Jessica AraszewskiDepartment of Tropical Plant and Soil Sciences, University of Hawai'i at Mānoa, Honolulu, HI, USA.
Joseph Carmelo M AverionDepartment of Tropical Plant and Soil Sciences, University of Hawai'i at Mānoa, Honolulu, HI, USA.
Katie StrachanDepartment of Tropical Plant and Soil Sciences, University of Hawai'i at Mānoa, Honolulu, HI, USA.
Kayla-Marie A TorresDepartment of Tropical Plant and Soil Sciences, University of Hawai'i at Mānoa, Honolulu, HI, USA.
Keara BotanesDepartment of Tropical Plant and Soil Sciences, University of Hawai'i at Mānoa, Honolulu, HI, USA.
Keilah C WilkesDepartment of Tropical Plant and Soil Sciences, University of Hawai'i at Mānoa, Honolulu, HI, USA.
Lydia RiggeDepartment of Tropical Plant and Soil Sciences, University of Hawai'i at Mānoa, Honolulu, HI, USA.
Malisa LoDepartment of Tropical Plant and Soil Sciences, University of Hawai'i at Mānoa, Honolulu, HI, USA.
Nicholas CarrDepartment of Tropical Plant and Soil Sciences, University of Hawai'i at Mānoa, Honolulu, HI, USA.
Noa BrennerDepartment of Tropical Plant and Soil Sciences, University of Hawai'i at Mānoa, Honolulu, HI, USA.
Olivia JohnsonDepartment of Tropical Plant and Soil Sciences, University of Hawai'i at Mānoa, Honolulu, HI, USA.
Roma Amor B MalasarteDepartment of Tropical Plant and Soil Sciences, University of Hawai'i at Mānoa, Honolulu, HI, USA.
Ruby NolandDepartment of Tropical Plant and Soil Sciences, University of Hawai'i at Mānoa, Honolulu, HI, USA.
Stefano NaldiniDepartment of Tropical Plant and Soil Sciences, University of Hawai'i at Mānoa, Honolulu, HI, USA.
Stephenie Andriana SantosDepartment of Tropical Plant and Soil Sciences, University of Hawai'i at Mānoa, Honolulu, HI, USA.
Tomas PierceDepartment of Tropical Plant and Soil Sciences, University of Hawai'i at Mānoa, Honolulu, HI, USA.
Urban HalpernDepartment of Tropical Plant and Soil Sciences, University of Hawai'i at Mānoa, Honolulu, HI, USA.
Zeus Gean Paul MiguelDepartment of Tropical Plant and Soil Sciences, University of Hawai'i at Mānoa, Honolulu, HI, USA.
Zhuocheng GanDepartment of Tropical Plant and Soil Sciences, University of Hawai'i at Mānoa, Honolulu, HI, USA.
Nhu H NguyenDepartment of Tropical Plant and Soil Sciences, University of Hawai'i at Mānoa, Honolulu, HI, USA. nhu.nguyen@hawaii.edu.

Funding

USDA National Institute of Food and Agriculture 2020-67037-30665/project accession number 2019-05082
6 · The paper itself

Abstract

This paper characterizes variation in shoot and root traits collected from the founders of the Maize Nested Association Mapping panel, which was designed to maximize genetic diversity while ensuring appropriate flowering in eastern North America. Here, we present a detailed account of greenhouse experiments conducted by four cohorts of undergraduate research interns at the University of Hawai'i at Mānoa. We summarize data collection, data cleaning procedures, and present data for 38 phenotypic variables for 24 genotypes with the number of plant replicates ranging from 3 to 20. The genotype B73 served as our experimental control to enable comparison over the four years. We also grew a subset of genotypes under different abiotic stress treatments to assess the phenotypic plasticity. These data can be used to predict the potential for different lines to function and capacity to adapt to different environments. Data are published on GitHub repositories, and have large reuse potential by the scientific community, as well as educators of undergraduate and graduate instruction.

Indexed as

Plant RootsSeedlingsZea maysChromosome MappingGenetic VariationGenotypePhenotypeStress, PhysiologicalNested association mapping population parentsPhenotypic diversityPhenotypingTemperateTropicalUndergraduate research

Identifiers

PMID40340921
PMCPMC12063293

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.