Evidence map›Paper›PMID 40340906›Full record

ArticleGenome biology2025

ZAR1 and ZAR2 orchestrate the dynamics of maternal mRNA polyadenylation during mouse oocyte development.

Yu-Ke Wu, Ruibao Su, Zhi-Yan Jiang, Yun-Wen Wu, Yan Rong, Shu-Yan Ji, Jingwen Liu, Zhuoyue Niu, Zhiyi Li, Yuanchao Xue and 2 more

Abstract read
In one paragraph

Article in Genome biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

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0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

12 authors.

Yu-Ke WuMOE Key Laboratory for Biosystems Homeostasis and Protection and Innovation Center for Cell Signaling Network, Life Sciences Institute, Zhejiang University, Hangzhou, 310058, China.
Ruibao SuKey Laboratory of RNA Biology, Institute of Biophysics, Chinese Academy of Sciences, Beijing, China.
Zhi-Yan JiangMOE Key Laboratory for Biosystems Homeostasis and Protection and Innovation Center for Cell Signaling Network, Life Sciences Institute, Zhejiang University, Hangzhou, 310058, China.
Yun-Wen WuMOE Key Laboratory for Biosystems Homeostasis and Protection and Innovation Center for Cell Signaling Network, Life Sciences Institute, Zhejiang University, Hangzhou, 310058, China.
Yan RongMOE Key Laboratory for Biosystems Homeostasis and Protection and Innovation Center for Cell Signaling Network, Life Sciences Institute, Zhejiang University, Hangzhou, 310058, China.
Shu-Yan JiInstitute of Medical Genetics and Development, Key Laboratory of Reproductive Genetics (Ministry of Education) and Women's Hospital, Zhejiang University School of Medicine, Zhejiang, 310006, China.
Jingwen LiuState Key Laboratory of Molecular Developmental Biology, Institute of Genetics and Developmental Biology, Beijing, China.
Zhuoyue NiuState Key Laboratory of Molecular Developmental Biology, Institute of Genetics and Developmental Biology, Beijing, China.
Zhiyi LiDepartment of Computer Science and Engineering, College of Engineering, The Ohio State University-Columbus, Columbus, Ohio, USA.
Yuanchao XueKey Laboratory of RNA Biology, Institute of Biophysics, Chinese Academy of Sciences, Beijing, China.
Falong LuState Key Laboratory of Molecular Developmental Biology, Institute of Genetics and Developmental Biology, Beijing, China.
Heng-Yu FanMOE Key Laboratory for Biosystems Homeostasis and Protection and Innovation Center for Cell Signaling Network, Life Sciences Institute, Zhejiang University, Hangzhou, 310058, China. hyfan@zju.edu.cn.

Funding

the National Natural Science Foundation of China 31930031the Natural Science Foundation of Zhejiang Province LD22C060001
6 · The paper itself

Abstract

backgroundDuring meiosis, the oocyte genome keeps dormant for a long time until zygotic genome activation. The dynamics and homeostasis of the maternal transcriptome are essential for maternal-to-zygotic transition. Zygotic arrest 1 (ZAR1) and its homolog, ZAR2, are RNA-binding proteins that are important for the regulation of maternal mRNA stability.

resultsSmart-seq2 analysis reveals drastically downregulated maternal transcripts. However, the detection of transcript levels by Smart-seq2 may be biased by the polyadenylated tail length of the mRNAs. Similarly, differential expression of maternal transcripts in oocytes with or without Zar1/2 differs when analyzed using total RNA-seq and Smart-seq2, suggesting an influence of polyadenylation. Combined analyses using total RNA-seq, LACE-seq, PAIso-seq2, and immunoprecipitation-mass spectrometry reveals that ZAR1 may target the 3'-untranslated regions of maternal transcripts, regulates their stability in germinal vesicle stage oocytes, and interacts with other proteins to control the polyadenylation of mRNAs.

conclusionsThe jointly analyzed multi-omics data highlight the limitations of Smart-seq2 in oocytes, clarify the dynamics of the maternal transcriptome, and uncover new roles of ZAR1 in regulating the maternal transcriptome.

Indexed as

Egg ProteinsOocytesOogenesisPolyadenylationRNA-Binding ProteinsRNA, Messenger, Stored3' Untranslated RegionsAnimalsFemaleGene Expression Regulation, DevelopmentalMiceRNA, MessengerRNA StabilityTranscriptome3' Untranslated RegionsEgg ProteinsRNA-Binding ProteinsRNA, MessengerRNA, Messenger, StoredMaternal-to-zygotic transitionMeiosisOocyte transcriptomeRNA-binding proteinsRNA polyadenylation

Identifiers

PMID40340906
PMCPMC12063454

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.