Evidence map›Paper›PMID 40340345›Full record

ArticleACS nano2025

Nanotubes Growth by Self-Assembly of DNA Strands at Room Temperature.

Laura Bourdon, Syed Pavel Afrose, Siddharth Agarwal, Debajyoti Das, Rajat Singh, Aurélie Di Cicco, Daniel Lévy, Ayako Yamada, Damien Baigl, Elisa Franco

Abstract read
In one paragraph

Article in ACS nano, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Isothermal assembly of DNA nanostructures.Chemical communications (Cambridge, England) · 2025
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Laura BourdonPASTEUR, Department of Chemistry, École Normale Supérieure, PSL University, Sorbonne Université, CNRS, Paris 75005, France.
Syed Pavel AfroseDepartment of Mechanical and Aerospace Engineering, University of California at Los Angeles, 420 Westwood Plaza, Los Angeles 90095, California, United States.
Siddharth AgarwalDepartment of Mechanical and Aerospace Engineering, University of California at Los Angeles, 420 Westwood Plaza, Los Angeles 90095, California, United States.
Debajyoti DasDepartment of Medicine, David Geffen School of Medicine, University of California, Los Angeles 90095, Los Angeles, California, United States.
Rajat SinghDepartment of Medicine, David Geffen School of Medicine, University of California, Los Angeles 90095, Los Angeles, California, United States.
Aurélie Di CiccoUniversité PSL, Sorbonne Université, CNRS UMR168, Laboratoire Physico-Chimie Curie, Institut Curie, Paris 75005, France.
Daniel LévyUniversité PSL, Sorbonne Université, CNRS UMR168, Laboratoire Physico-Chimie Curie, Institut Curie, Paris 75005, France.
Ayako YamadaPASTEUR, Department of Chemistry, École Normale Supérieure, PSL University, Sorbonne Université, CNRS, Paris 75005, France.ORCID 0000-0003-3162-3318
Damien BaiglPASTEUR, Department of Chemistry, École Normale Supérieure, PSL University, Sorbonne Université, CNRS, Paris 75005, France.ORCID 0000-0003-1772-3080
Elisa FrancoDepartment of Mechanical and Aerospace Engineering, University of California at Los Angeles, 420 Westwood Plaza, Los Angeles 90095, California, United States.ORCID 0000-0003-1103-2668

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Artificial biomolecular nanotubes are a promising approach to building materials mimicking the capacity of the cellular cytoskeleton to grow and self-organize dynamically. Nucleic acid nanotechnology has demonstrated a variety of self-assembling nanotubes with programmable, robust features and morphological similarities to actual cytoskeleton components. However, their production typically requires thermal annealing, which not only poses a general constraint on their potential applications but is also incompatible with physiological conditions. Here, we demonstrate that DNA nanotubes can self-assemble from a simple mixture of five short DNA strands at constant room temperature, growing for extended periods of time in bulk conditions as well as under confinement. Assembly is achieved using a monovalent salt buffer, which ensures a faithful nanoscale arrangement and avoids nanotube aggregation. We observe the formation of individual nanotubes up to 20 days with a diameter of 22 ± 4 nm and length of several tens of micrometers. We finally encapsulate the strands in microsized compartments, such as water-in-oil microdroplets and giant unilamellar vesicles serving as simple cell models. Notably, nanotubes not only isothermally self-assemble directly inside the microcompartments but also self-organize into dynamic higher-order structures resembling rings and dynamic networks. Our study provides an advantageous method for

Indexed as

DNANanotechnologyNanotubesTemperatureDNADNA nanotechnologyDNA tilegiant unilamellar vesicleisothermal assemblymicrodropletself-organizationsynthetic cell

Identifiers

PMID40340345
PMCPMC12120994

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.