Evidence map›Paper›PMID 40332413›Full record

ArticleInternational journal of molecular sciences2025

Transcriptomic and Metabolomic Insights into Plant Hormone Modulation and Secondary Metabolite Accumulation in Basil Under Far-Red and Ultraviolet-A Light.

Dandan Li, Haibin Shen, Lishu Yu, Kaili Zhu, Yongxue Zhang, Shaofang Wu, Liying Chang, Xiaotao Ding, Yuping Jiang

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in International journal of molecular sciences, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Dandan LiCollege of Ecological Technology and Engineering, Shanghai Institute of Technology, Shanghai 201418, China.
Haibin ShenShanghai Key Laboratory of Protected Horticulture Technology, Horticultural Research Institute, Shanghai Academy of Agricultural Science, Shanghai 201403, China.
Lishu YuCollege of Ecological Technology and Engineering, Shanghai Institute of Technology, Shanghai 201418, China.ORCID 0009-0001-6637-1563
Kaili ZhuCollege of Ecological Technology and Engineering, Shanghai Institute of Technology, Shanghai 201418, China.
Yongxue ZhangShanghai Key Laboratory of Protected Horticulture Technology, Horticultural Research Institute, Shanghai Academy of Agricultural Science, Shanghai 201403, China.ORCID 0000-0003-3661-3063
Shaofang WuShanghai Key Laboratory of Protected Horticulture Technology, Horticultural Research Institute, Shanghai Academy of Agricultural Science, Shanghai 201403, China.
Liying ChangSchool of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai 200240, China.ORCID 0000-0001-5987-1765
Xiaotao DingShanghai Key Laboratory of Protected Horticulture Technology, Horticultural Research Institute, Shanghai Academy of Agricultural Science, Shanghai 201403, China.ORCID 0000-0002-1665-5285
Yuping JiangCollege of Ecological Technology and Engineering, Shanghai Institute of Technology, Shanghai 201418, China.

Funding

Excellent Team Program of the Shanghai Academy of Agricultural Sciences grant no. [2022]022Natural Science Foundation of Shanghai grant no. 22ZR1460500
6 · The paper itself

Abstract

In this study, red-blue light (7R3B) was used as the control (CK), while far-red (FR) and ultraviolet-A (UVA) light were supplemented to evaluate their effects on basil growth. The results showed that the FR treatment promoted plant height, stem diameter, and biomass, but reduced chlorophyll and carotenoid content, while the UVA treatment increased stem diameter and chlorophyll b content. Meanwhile, transcriptomic and metabolomic analyses were employed to examine changes in gene expression and metabolite accumulation in basil. The FR treatment reduced the levels of differentially accumulated metabolites (DAMs) in the carotenoid biosynthesis pathway, potentially contributing to the observed decrease in chlorophyll. The FR treatment upregulated the levels of five DAMs (gibberellin, cytokinin, brassinosteroid, jasmonic acid, and salicylic acid) and altered the differentially expressed genes (DEGs) such as

Indexed as

MetabolomeOcimum basilicumPlant Growth RegulatorsSecondary MetabolismTranscriptomeUltraviolet RaysCarotenoidsChlorophyllFlavonoidsGene Expression ProfilingGene Expression Regulation, PlantLightMetabolomicsPlant ProteinsSignal TransductionCarotenoidsChlorophyllFlavonoidsPlant Growth RegulatorsPlant Proteinsflavonoid biosynthesisFR lightGAJAUVA light

Identifiers

PMID40332413
PMCPMC12027552

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.