Evidence map›Paper›PMID 40331941›Full record

ArticleInternational journal of molecular sciences2025

Transcriptomic Comparison of Rice lncRNAs in Response to Feeding by Brown Planthopper Populations with Different Virulence.

Yaxuan Wang, Xinfeng Wang, Kunjie Zhang, Jing Xiao, Fang Liu, Houhong Yang, Yubiao Cai, Fengxiang Lai, Qiang Fu, Pinjun Wan

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in International journal of molecular sciences, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Yaxuan WangThe National Key Laboratory of Rice Biological Breeding, China National Rice Research Institute, Hangzhou 311401, China.
Xinfeng WangThe National Key Laboratory of Rice Biological Breeding, China National Rice Research Institute, Hangzhou 311401, China.
Kunjie ZhangThe National Key Laboratory of Rice Biological Breeding, China National Rice Research Institute, Hangzhou 311401, China.
Jing XiaoThe National Key Laboratory of Rice Biological Breeding, China National Rice Research Institute, Hangzhou 311401, China.
Fang LiuThe National Key Laboratory of Rice Biological Breeding, China National Rice Research Institute, Hangzhou 311401, China.
Houhong YangThe National Key Laboratory of Rice Biological Breeding, China National Rice Research Institute, Hangzhou 311401, China.
Yubiao CaiThe National Key Laboratory of Rice Biological Breeding, China National Rice Research Institute, Hangzhou 311401, China.
Fengxiang LaiThe National Key Laboratory of Rice Biological Breeding, China National Rice Research Institute, Hangzhou 311401, China.
Qiang FuThe National Key Laboratory of Rice Biological Breeding, China National Rice Research Institute, Hangzhou 311401, China.
Pinjun WanThe National Key Laboratory of Rice Biological Breeding, China National Rice Research Institute, Hangzhou 311401, China.ORCID 0000-0002-6786-2567

Funding

China Agriculture Research System CARS-01National Key Research and Development Program of China 2024YFD1401003Research Funds for Central Public Welfare Research Institute CPSIBRF-CNRRI-202406Rice Pest Management Research Group of the Agri-cultural Science and Technology Innovation Program of China Academy of Agricultural Science CAAS-ASTIP-2021-CNRRI
6 · The paper itself

Abstract

The brown planthopper (BPH) is one of the major rice pests causing significant damage to rice production worldwide, due to its high reproductive capacity and strong migratory ability. A series of BPH-resistant rice varieties have been developed, but the durability of effective resistance is constrained by the evolution of BPH virulence, requiring in-depth insights into resistance mechanisms. In this paper, we used strand-specific lncRNA-seq to characterize the lncRNA regulatory mechanisms on rice response to BPH infestation. Overall, 4321 lncRNAs were identified, 60 of which were significantly upregulated in response to BPH infestation, specifically differing between BPH populations with variable virulence. Differential expression analysis and qRT-PCR validation showed that these lncRNAs are involved in the regulation of several defense pathways, including jasmonic acid signaling and flavonoid biosynthesis, with their distinct roles in resistant and susceptible rice varieties. Notably, lncRNAs like

Indexed as

HemipteraOryzaRNA, Long NoncodingTranscriptomeAnimalsDisease ResistanceGene Expression ProfilingGene Expression Regulation, PlantPlant DiseasesVirulenceRNA, Long Noncodingbrown planthopper and rice interactionjasmonic acidstrand-specific lncRNA-seqvirulence

Identifiers

PMID40331941
PMCPMC12026508

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.