Evidence map›Paper›PMID 40331299›Full record

ArticleEcology2025

A classification-occupancy model based on automatically identified species data.

Ryo Ogawa, Frédéric Gosselin, Kevin F A Darras, Stephanie Roilo, Anna F Cord

Abstract read
In one paragraph

Article in Ecology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Ryo OgawaAgro-Ecological Modeling Group, Institute of Crop Science and Resource Conservation, University of Bonn, Bonn, Germany.ORCID https://orcid.org/0000-0002-6991-5976
Frédéric GosselinINRAE, UR EFNO, Nogent-sur-Vernisson, France.ORCID https://orcid.org/0000-0003-3737-106X
Kevin F A DarrasChair of Computational Landscape Ecology, TUD Dresden University of Technology, Dresden, Germany.ORCID https://orcid.org/0000-0002-9013-3784
Stephanie RoiloAgro-Ecological Modeling Group, Institute of Crop Science and Resource Conservation, University of Bonn, Bonn, Germany.ORCID https://orcid.org/0000-0002-1826-9978
Anna F CordAgro-Ecological Modeling Group, Institute of Crop Science and Resource Conservation, University of Bonn, Bonn, Germany.ORCID https://orcid.org/0000-0003-3183-8482

Funding

Bundesministerium für Bildung und Forschung 03LW0079KDeutsche Forschungsgemeinschaft EXC 2070 - 390732324Horizon 2020 Framework Programme 817501
6 · The paper itself

Abstract

Occupancy models estimate a species' occupancy probability while accounting for imperfect detection, but often overlook the issue of false-positive detections. This problem of false positives has gained attention recently with the rapid advancement of automated species detection tools using artificial intelligence (AI), which generate continuous confidence scores for each species detection. Novel occupancy models have been introduced that integrate these confidence scores to identify false positives, but these models require thorough assessments of diagnosis and validation. Here, we propose a new occupancy model based solely on AI-detected species data. We conducted simulations to examine the inferential and predictive accuracies with known true parameters and analyzed AI-detected species data to test the practical usefulness through goodness-of-fit tests and evaluation with external data. Our proposed model mostly outperformed alternative models that ignore imperfect detection or false-positive error probabilities in terms of accuracy in simulation analyses and goodness-of-fit tests in the case study, but not in terms of discrimination metrics based on external data. The proposed occupancy model aids in understanding species-habitat relationships and developing automated biodiversity monitoring workflows by accounting for both false-negative and false-positive errors.

Indexed as

Artificial IntelligenceEcosystemModels, BiologicalAnimalsComputer SimulationSpecies Specificityautomated biodiversity monitoringBayesian statisticsBirdNETfalse positivemodel integrationpassive acoustic monitoringprobabilistic samplingspecies classifier

Identifiers

PMID40331299
PMCPMC12056683

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.