Evidence map›Paper›PMID 40328763›Full record

ArticleNature communications2025

LEC2 induces somatic cell reprogramming through epigenetic activation of plant cell totipotency regulators.

Jing Peng, Qi Zhang, Li Ping Tang, Biao Jie Xu, Thomas Laux, Xian Sheng Zhang, Ying Hua Su

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Review
  2. Article
  3. Cell-specific dedifferentiation inbioRxiv : the preprint server for biology · 2026
    Article
  4. Review
  5. Cell cycle in plant development and reprogramming.Development (Cambridge, England) · 2026
    Review
  6. Article
  7. Review
  8. Review
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Jing Peng *National Key Laboratory of Wheat Improvement, College of Life Sciences, Shandong Agricultural University, Tai'an, Shandong, China.ORCID http://orcid.org/0009-0002-3216-5144
Qi Zhang *National Key Laboratory of Wheat Improvement, College of Life Sciences, Shandong Agricultural University, Tai'an, Shandong, China.
Li Ping Tang *National Key Laboratory of Wheat Improvement, College of Life Sciences, Shandong Agricultural University, Tai'an, Shandong, China.ORCID http://orcid.org/0000-0002-4720-6976
Biao Jie XuNational Key Laboratory of Wheat Improvement, College of Life Sciences, Shandong Agricultural University, Tai'an, Shandong, China.ORCID http://orcid.org/0009-0008-0421-781X
Thomas LauxSino-German Joint Research Center on Agricultural Biology, Shandong Agricultural University, Tai'an, Shandong, China.ORCID http://orcid.org/0000-0001-6659-0515
Xian Sheng ZhangNational Key Laboratory of Wheat Improvement, College of Life Sciences, Shandong Agricultural University, Tai'an, Shandong, China.ORCID http://orcid.org/0000-0002-3129-5206
Ying Hua SuNational Key Laboratory of Wheat Improvement, College of Life Sciences, Shandong Agricultural University, Tai'an, Shandong, China. suyh@sdau.edu.cn.ORCID http://orcid.org/0000-0002-6071-9565

Funding

National Natural Science Foundation of China (National Science Foundation of China) 32070199
6 · The paper itself

Abstract

Many plant species can develop embryos from somatic cells without fertilization. During this process, known as somatic embryogenesis, changes in the DNA methylation patterns are characteristic of reprogramming somatic cells into an embryogenic state. However, the underlying mechanisms connecting DNA methylation and activating totipotency-regulating genes have remained largely unknown. Here, we show that during somatic embryogenesis induced by overexpressing the totipotency-regulating transcription factor LEAFY COTYLEDON2 (LEC2) in Arabidopsis, CHH hypermethylation is deposited by the LEC2-activated RNA-directed DNA methylation (RdDM) pathway. A reader complex composed of SU(VAR)3-9 HOMOLOGS (SUVH) and its chaperone SUVH-INTERACTING DNAJ DOMAIN-CONTAINING PROTEIN (SDJ) binds to the CHH hypermethylated regions and recruits AT-HOOK MOTIF CONTAINING NUCLEAR LOCALIZED (AHL) chromatin modification proteins to increase chromatin accessibility, resulting in the transcriptional activation of totipotency-regulating genes. Our work reveals a molecular framework of how epigenetic modifications mediate somatic cell reprogramming, offering a pathway toward enhancing somatic embryogenesis in agricultural regeneration biology.

Indexed as

ArabidopsisArabidopsis ProteinsCellular ReprogrammingEpigenesis, GeneticPlant CellsTranscription FactorsChromatinDNA MethylationGene Expression Regulation, PlantPlants, Genetically ModifiedArabidopsis ProteinsChromatinTranscription Factors

Identifiers

PMID40328763
PMCPMC12056068

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.