Evidence map›Paper›PMID 40328444›Full record

ArticlePharmacoepidemiology and drug safety2025

Validity of Diagnostic Codes and Laboratory Tests to Identify Cholangiocarcinoma and Its Subtypes.

Nicole D Ferrante, Rebecca A Hubbard, Kelley Weinfurtner, Anya I Mezina, Craig W Newcomb, Emma E Furth, Debika Bhattacharya, Basile Njei, Tamar H Taddei, Amit Singal and 4 more

Abstract readValidation Study
In one paragraph

Article in Pharmacoepidemiology and drug safety, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

14 authors.

Nicole D FerranteDivision of Gastroenterology and Hepatology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA.ORCID https://orcid.org/0000-0001-8794-9304
Rebecca A HubbardCenter for Real-World Effectiveness and Safety of Therapeutics, Center for Clinical Epidemiology and Biostatistics, Department of Biostatistics, Epidemiology, and Informatics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
Kelley WeinfurtnerDivision of Gastroenterology and Hepatology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
Anya I MezinaDivision of Gastroenterology and Hepatology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
Craig W NewcombCenter for Real-World Effectiveness and Safety of Therapeutics, Center for Clinical Epidemiology and Biostatistics, Department of Biostatistics, Epidemiology, and Informatics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
Emma E FurthDivision of Pathology, Department of Medicine, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
Debika BhattacharyaDepartment of Medicine, Division of Infectious Diseases, David Geffen School of Medicine, University of California, Los Angeles, California, USA.
Basile NjeiYale School of Medicine, Yale Center for Clinical Investigation, New Haven, Connecticut, USA.
Tamar H TaddeiVA Connecticut Health System, West Haven, Connecticut, USA.
Amit SingalDivision of Digestive and Liver Diseases, UT Southwestern Medical Center, Dallas, Texas, USA.
Maarouf A HoteitDivision of Gastroenterology and Hepatology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
Lesley S ParkVA Connecticut Health System, West Haven, Connecticut, USA.
David KaplanDivision of Gastroenterology and Hepatology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
Vincent Lo ReCenter for Real-World Effectiveness and Safety of Therapeutics, Center for Clinical Epidemiology and Biostatistics, Department of Biostatistics, Epidemiology, and Informatics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA.ORCID https://orcid.org/0000-0001-7955-0600

Funding

CLINICAL EPIDEMIOLOGY TRAINING IN GASTROENTEROLOGYT32DK007740 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI James D Lewis · 1997 to 2026
$9.2M
The HIV and Alcohol Research center focused on Polypharmacy (HARP)P01AA029545 · NIAAA · YALE UNIVERSITY · PI JUSTICE, AMY CAROLINE · 2021 to 2025
$6.3M
Sex Disparities in Overall Response to ART Among HIV Infected IndividualsU24AA020794 · NIAAA · YALE UNIVERSITY · PI JUSTICE, AMY CAROLINE · 2011 to 2020
$5.5M
(PQ4)HIV and Aging Mechanisms for Hepatocellular CancerR01CA206465 · NCI · YALE UNIVERSITY · PI JUSTICE, AMY CAROLINE, LO RE, VINCENT · 2016 to 2020
$2.5M
NCI NIH HHS R01 CA206465NIAAA NIH HHS P01 AA029545NIAAA NIH HHS U24 AA020794NIDDK NIH HHS T32 DK007740P01 AA029545R01 CA206465T32 DK007740U24 AA020794
6 · The paper itself

Abstract

backgroundThe absence of validated methods to identify cholangiocarcinoma in real-world data has prevented the conduct of pharmacoepidemiologic studies to evaluate determinants of this malignancy and examine the effectiveness of cholangiocarcinoma treatments.

objectiveTo determine the accuracy of International Classification of Diseases for Oncology, Third Edition (ICD-O-3)-based algorithms to identify cholangiocarcinoma and its subtype (intrahepatic or extrahepatic) within US Veterans Health Administration (VA) data.

methodsWe identified patients with cholangiocarcinoma ICD-O-3 diagnosis codes from January 2000-December 2019 in VA data. We developed eight algorithms utilizing ICD-O-3 histology codes for cholangiocarcinoma and further used ICD-O-3 topography codes for location (liver, intrahepatic bile duct, extrahepatic bile duct) plus maximum total bilirubin (≥ 3 mg/dL vs. < 3 mg/dL) within ± 45 days of diagnosis to identify cholangiocarcinoma subtype. Up to 80 patients were randomly selected for each algorithm, and their records were reviewed by two hepatologists. The positive predictive values (PPV) and 95% confidence interval (CI) for each algorithm were estimated.

resultsAmong 2934 unique patients who met inclusion criteria, 574 were randomly selected for validation. All eight algorithms had high PPV for definite or probable cholangiocarcinoma, ranging from 83.8% (95% CI, 73.8%-91.1%) to 100.0% (95% CI, 95.5%-100.0%). Among three algorithms to identify intrahepatic cholangiocarcinoma, two had PPV ≥ 80% (range: 88.8% [95% CI, 79.7%-94.7%]-91.3% [95% CI, 82.8%-96.4%]). Among five algorithms to identify extrahepatic cholangiocarcinoma, four had PPV ≥ 80% (range: 80.0% [95% CI, 69.6%-88.1%]-94.0% [83.5%-98.7%]).

conclusionThese algorithms can be used in future pharmacoepidemiologic studies to evaluate medications associated with intrahepatic or extrahepatic cholangiocarcinoma.

Indexed as

AlgorithmsBile Duct NeoplasmsCholangiocarcinomaInternational Classification of DiseasesAgedFemaleHumansMaleMiddle AgedPharmacoepidemiologyPredictive Value of TestsReproducibility of ResultsRetrospective StudiesUnited StatesUnited States Department of Veterans Affairscholangiocarcinomaliver canceroutcomesvalidation studies

Identifiers

PMID40328444
PMCPMC12055315

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