Evidence map›Paper›PMID 40327364›Full record

ArticleMolecular biology of the cell2025

Deep learning-driven imaging of cell division and cell growth across an entire eukaryotic life cycle.

Taylor Kennedy, Berk Yalcinkaya, Shreya Ramakanth, Sandhya Neupane, Nika Tadić, Nicolas E Buchler, Orlando Argüello-Miranda

Abstract read
In one paragraph

Article in Molecular biology of the cell, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors.

Taylor KennedyDepartment of Plant and Microbial Biology, North Carolina State University, Raleigh, NC 27607.
Berk YalcinkayaDepartment of Plant and Microbial Biology, North Carolina State University, Raleigh, NC 27607.
Shreya RamakanthDepartment of Plant and Microbial Biology, North Carolina State University, Raleigh, NC 27607.
Sandhya NeupaneDepartment of Plant and Microbial Biology, North Carolina State University, Raleigh, NC 27607.
Nika TadićDepartment of Plant and Microbial Biology, North Carolina State University, Raleigh, NC 27607.
Nicolas E BuchlerDepartment of Molecular Biomedical Sciences, North Carolina State University, Raleigh, NC 27606.
Orlando Argüello-MirandaDepartment of Plant and Microbial Biology, North Carolina State University, Raleigh, NC 27607.

Funding

Measuring and perturbing metabolic rhythms and the cell division cycle in single cellsR01GM127614 · NIGMS · NORTH CAROLINA STATE UNIVERSITY RALEIGH · PI BUCHLER, NICOLAS EMILE · 2018 to 2021
$1.2M
Systems biology of quiescence entryR00GM135487 · NIGMS · NORTH CAROLINA STATE UNIVERSITY RALEIGH · PI ARGÜELLO-MIRANDA, ORLANDO · 2022 to 2024
$747k
NIGMS NIH HHS R00 GM135487NIGMS NIH HHS R01 GM127614
6 · The paper itself

Abstract

The life cycle of eukaryotic microorganisms involves complex transitions between states such as dormancy, mating, meiosis, and cell division, which are often studied independently from each other. Therefore, most microbial life cycles are theoretical reconstructions from partial observations of cellular states. Here we show that complete microbial life cycles can be directly and continuously studied by combining microfluidic culturing, life cycle stage-specific segmentation of micrographs, and a novel cell tracking algorithm, FIEST, based on deep learning video frame interpolation. As proof of principle, we quantitatively imaged and compared cell growth and the activity state of the cell division kinase, Cdk1, across the life cycle of

Indexed as

Cell DivisionDeep LearningSaccharomyces cerevisiaeAlgorithmsCDC2 Protein KinaseCell CycleCell ProliferationLife Cycle StagesMeiosisSaccharomyces cerevisiae ProteinsCDC2 Protein KinaseSaccharomyces cerevisiae Proteins

Identifiers

PMID40327364
PMCPMC12206501

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.