Evidence map›Paper›PMID 40327081›Full record

ArticleArchives of toxicology2025

A clinical chemical atlas of xenobiotic toxicity for the Sprague-Dawley rat.

Janonna Kadyrov, Samuele Sala, Lucy Grigoroff, Novia Minaee, Reika Masuda, Samantha Lodge, Timothy M Ebbels, Michael D Reily, Donald Robertson, Lois Lehman-McKeeman and 7 more

Abstract read
In one paragraph

Article in Archives of toxicology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Janonna KadyrovAustralian National Phenome Centre, Health Futures Institute, Murdoch University, Perth, WA, Australia.
Samuele SalaAustralian National Phenome Centre, Health Futures Institute, Murdoch University, Perth, WA, Australia.
Lucy GrigoroffAustralian National Phenome Centre, Health Futures Institute, Murdoch University, Perth, WA, Australia.
Novia MinaeeAustralian National Phenome Centre, Health Futures Institute, Murdoch University, Perth, WA, Australia.
Reika MasudaAustralian National Phenome Centre, Health Futures Institute, Murdoch University, Perth, WA, Australia.
Samantha LodgeAustralian National Phenome Centre, Health Futures Institute, Murdoch University, Perth, WA, Australia.
Timothy M EbbelsDepartment of Metabolism, Digestion and Reproduction, Faculty of Medicine, Hammersmith Campus, Imperial College London, London, W12 0NN, UK.
Michael D ReilyFormerly Pfizer Global R&D, Ann Arbor, MI, USA.
Donald RobertsonFormerly Pfizer Global R&D, Ann Arbor, MI, USA.
Lois Lehman-McKeemanFormerly Bristol-Myers-Squibb Company, Princeton, NJ, USA.
John ShockcorFormerly Drug Metabolism and Pharmacokinetics Section, Dupont Pharmaceuticals Company, Stine-Haskell Research Center, Newark, Delaware, USA.
Bruce D CarFormerly Bristol-Myers-Squibb Company, Princeton, NJ, USA.
Glenn H CantorFormerly Bristol-Myers-Squibb Company, Princeton, NJ, USA.
John C LindonDepartment of Metabolism, Digestion and Reproduction, Faculty of Medicine, Imperial College London, London, UK.
Jeremy K NicholsonAustralian National Phenome Centre, Health Futures Institute, Murdoch University, Perth, WA, Australia. Jeremy.Nicholson@murdoch.edu.au.
Elaine HolmesAustralian National Phenome Centre, Health Futures Institute, Murdoch University, Perth, WA, Australia. Elaine.Holmes@murdoch.edu.au.
Julien WistAustralian National Phenome Centre, Health Futures Institute, Murdoch University, Perth, WA, Australia. Julien.wist@murdoch.edu.au.ORCID http://orcid.org/0000-0002-3416-2572

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Consortium for Metabonomic Toxicology (COMET) studies was designed to model metabolic responses to organ- and mechanism-specific toxins to predict acute drug toxicity in rats. A range of clinical chemical parameters were measured in 7-day toxicology studies for 86 toxins eliciting a range of organ- and mechanism-specific effects. Additionally, 21 surgical or physiological stressors were evaluated to identify physiological or metabolic responses that might confound the interpretation of observed toxicity profiles. From these studies on a total of 3473 rats measured at six pharmaceutical companies, we provide a set of 12 serum and 5 urine physical and clinical chemistry parameters. Samples were collected at 24 h, 48 h and 168 h post-dose for each animal and are presented as a downloadable database file. We also summarise the main observations based on the group response at the level of the individual toxin. We demonstrate that correlations between parameters, such as serum bilirubin and aspartate aminotransferase (AST), provide a more nuanced profile of organ-specific toxicity than consideration of individual parameters alone. In addition, we highlight the variability in the measured parameters across the dataset attributable to inter-laboratory differences, and the heterogeneity of metabolic responses to particular compounds or differences in temporal patterns of response. This clinical chemistry atlas of toxicity serves as a valuable reference tool for evaluating the potential toxicity of novel drug candidates.

Indexed as

Toxicity Tests, AcuteXenobioticsAnimalsAspartate AminotransferasesBilirubinFemaleMaleMetabolomicsRatsRats, Sprague-DawleyAspartate AminotransferasesBilirubinXenobioticsBiofluidClinical chemistryCOMET projectRatsSprague–DawleyToxicity

Identifiers

PMID40327081
PMCPMC12185569

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.