Evidence map›Paper›PMID 40325436›Full record

ArticleMolecular horticulture2025

Histone deacetylases repress the accumulation of licochalcone A by inhibiting the expression of flavonoid biosynthetic pathway-related genes in licorice (Glycyrrhiza inflata).

Jiangyi Zeng, Xiaoling Ma, Yuping Li, Lijun Zhou, Jingxian Fu, Hongxia Wang, Yongliang Liu, Ling Yuan, Ying Wang, Yongqing Li

Abstract read
In one paragraph

Article in Molecular horticulture, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Review
  3. Frontiers in plant science · 2026
    Article
  4. Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Jiangyi Zeng *Guangdong Provincial Key Laboratory of Applied Botany, South China, Botanical Garden, Chinese Academy of Sciences, Guangzhou, 510650, China.
Xiaoling Ma *Guangdong Provincial Key Laboratory of Applied Botany, South China, Botanical Garden, Chinese Academy of Sciences, Guangzhou, 510650, China.
Yuping Li *Guangdong Provincial Key Laboratory of Applied Botany, South China, Botanical Garden, Chinese Academy of Sciences, Guangzhou, 510650, China.
Lijun ZhouGuangdong Provincial Key Laboratory of Applied Botany, South China, Botanical Garden, Chinese Academy of Sciences, Guangzhou, 510650, China.
Jingxian FuGuangdong Provincial Key Laboratory of Applied Botany, South China, Botanical Garden, Chinese Academy of Sciences, Guangzhou, 510650, China.
Hongxia WangUniversity of Chinese Academy of Sciences, Beijing, 100049, China.
Yongliang LiuDepartment of Plant and Soil Sciences, University of Kentucky, Lexington, KY, 40506, USA.
Ling YuanDepartment of Plant and Soil Sciences, University of Kentucky, Lexington, KY, 40506, USA. lyuan3@uky.edu.
Ying WangGuangdong Provincial Key Laboratory of Applied Botany, South China, Botanical Garden, Chinese Academy of Sciences, Guangzhou, 510650, China. yingwang@scib.ac.cn.
Yongqing LiGuangdong Provincial Key Laboratory of Applied Botany, South China, Botanical Garden, Chinese Academy of Sciences, Guangzhou, 510650, China. liyongqing@scbg.ac.cn.ORCID http://orcid.org/0000-0001-8017-2045

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Histone deacetylases (HDACs) play a crucial role in regulating plant growth, stress responses, and specialized metabolism. Licorice, utilized as both food and herbal medicine for millennia, includes Glycyrrhiza inflata as one of its primary medicinal species used globally. This study investigated the regulatory function of HDAC-mediated histone deacetylation in flavonoid biosynthesis in licorice. The research identified nineteen HDACs in the G. inflata genome. Abiotic stresses and plant hormones were found to influence flavonoid compound accumulation, correlating with altered expression patterns of HDAC genes and global histone H3 acetylation (H3ac) levels. Notably, several HDAC inhibitors enhanced flavonoid accumulation in G. inflata. Subsequent RNA-seq analysis revealed that the HDAC inhibitor suberoylanilide hydroxamic acid (SAHA) activated the expression of multiple genes related to flavonoid biosynthesis. ChIP-qPCR demonstrated that SAHA treatment increased the H3ac levels of flavonoid synthesis-related genes. Furthermore, overexpression of GiHDA2b, an HDAC member, decreased, while RNAi of GiHDA2b increased, the levels of expression and H3K18 acetylation of licochalcone A (LCA) biosynthetic genes indicating its negative role in flavonoid biosynthesis. This research provides valuable insights into the regulatory roles of GiHDACs and histone deacetylation in flavonoid biosynthesis in licorice, potentially contributing to improved bioactive compound production in medicinal plants.

Indexed as

FlavonoidGlycyrrhiza inflata B.Histone deacetylaseHistone deacetylase inhibitorLicochalcone A

Identifiers

PMID40325436
PMCPMC12053865

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.