Evidence map›Paper›PMID 40324004›Full record

ArticlePLoS genetics2025

Coordination of cell envelope biology by Escherichia coli MarA protein potentiates intrinsic antibiotic resistance.

Alexandra E Trigg, Prateek Sharma, David C Grainger

Abstract read
In one paragraph

Article in PLoS genetics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Review
  2. Thermal Shifts Dominate Single-Gene Responses to Transcription-Targeting Antibiotics.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
  3. Article
  4. Article
  5. EnteroaggregativeFrontiers in microbiology · 2025
    Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Alexandra E TriggSchool of Biosciences, University if Birmingham, Edgbaston, Birmingham, England.ORCID https://orcid.org/0009-0003-9193-0034
Prateek SharmaSchool of Biosciences, University if Birmingham, Edgbaston, Birmingham, England.
David C GraingerSchool of Biosciences, University if Birmingham, Edgbaston, Birmingham, England.ORCID https://orcid.org/0000-0003-3375-5154

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The multiple antibiotic resistance activator (MarA) protein is a transcription factor implicated in control of intrinsic antibiotic resistance in enteric bacterial pathogens. In this work, we screened the Escherichia coli genome computationally for MarA binding sites. By incorporating global maps of transcription initiation, and clustering predicted targets according to gene function, we were able to avoid widespread misidentification of MarA sites, which has hindered prior studies. Subsequent genetic and biochemical analyses identified direct activation of genes for lipopolysaccharide (LPS) biosynthesis and repression of a cell wall remodelling endopeptidase. Rewiring of the MarA regulon, by mutating subsets of MarA binding sites, reveals synergistic interactions between regulatory targets of MarA. Specifically, we show that uncoupling LPS production, or cell wall remodelling, from regulation by MarA, renders cells hypersensitive to mutations altering lipid trafficking by the MlaFEDCB system. Together, our findings demonstrate how MarA co-regulates different aspects of cell envelope biology to maximise antibiotic resistance.

Indexed as

Cell WallDNA-Binding ProteinsDrug Resistance, BacterialEscherichia coliEscherichia coli ProteinsAnti-Bacterial AgentsBinding SitesGene Expression Regulation, BacterialLipopolysaccharidesRegulonTranscription FactorsAnti-Bacterial AgentsDNA-Binding ProteinsEscherichia coli ProteinsLipopolysaccharidesMarA protein, E coliTranscription Factors

Identifiers

PMID40324004
PMCPMC12052159

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.