Evidence map›Paper›PMID 40322017›Full record

ArticleBiomedical optics express2025

Increasing the acquisition speed in oblique plane microscopy via aliasing.

Conor McFadden, James D Manton, Holly Merta, Reto Fiolka

Abstract read
In one paragraph

Article in Biomedical optics express, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors.

Conor McFaddenLyda Hill Department of Bioinformatics, UT Southwestern Medical Center, Dallas, TX 75390, USA.
James D MantonMRC Laboratory of Molecular Biology, Cambridge, UK.ORCID https://orcid.org/0000-0001-9260-3156
Holly MertaDepartment of Cell Biology, UT Southwestern Medical Center, Dallas, TX 75390, USA.
Reto FiolkaLyda Hill Department of Bioinformatics, UT Southwestern Medical Center, Dallas, TX 75390, USA.

Funding

Spatial determinants in lipid metabolic organization at the sub-organelle levelR35GM119768 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI Mike Henne · 2016 to 2026
$4.1M
Transformative microscopes to image across spatiotemporal scalesR35GM133522 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI Reto Paul Fiolka · 2019 to 2026
$3.1M
Omni Oblique Plane Microscope to spread light-sheet based imaging in biomedical researchR01EB035538 · NIBIB · UT SOUTHWESTERN MEDICAL CENTER · PI Reto Paul Fiolka · 2024 to 2026
$1.0M
Role of ER-to-actin tethering in cell migrationF32GM154450 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI MERTA, HOLLY · 2024 to 2024
$80k
NIBIB NIH HHS R01 EB035538NIGMS NIH HHS F32 GM154450NIGMS NIH HHS R35 GM119768NIGMS NIH HHS R35 GM133522
6 · The paper itself

Abstract

Oblique plane microscopy (OPM), a variant of light-sheet fluorescence microscopy (LSFM), enables rapid volumetric imaging without mechanically scanning the sample or an objective. In an OPM, the sample space is mapped to a distortion-free image space via remote focusing, and the oblique light-sheet plane is mapped onto a camera via a tilted tertiary imaging system. As a result, the 3D point-spread function and optical transfer function (OTF) are tilted to the optical axis of the tertiary imaging system. To satisfy Nyquist sampling, small scanning steps are required to encompass the tilted 3D OTF, slowing down acquisition and increasing sample exposure. Here, we show that a judicious amount of under-sampling can lead to a form of aliasing in OPM that can be recovered without a loss of spatial resolution while minimizing artifacts. The resulting speed gains depend on the optical parameters of the system and reach 2-4-fold in our demonstrations. We leverage this method for rapid subcellular 3D imaging of mitochondria and the endoplasmic reticulum.

Identifiers

PMID40322017
PMCPMC12047713

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.