Evidence map›Paper›PMID 40321206›Full record

ArticlebioRxiv : the preprint server for biology2025

Modular regulation of the stem cell transcriptome defines self-renewal, differentiation, and dedifferentiation.

Amelie Raz, Hafidh Hassan, Yukiko Yamashita

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

3 authors.

Amelie RazWhitehead Institute for Biomedical Research, 455 Main St, Cambridge MA 02142.ORCID 0000-0002-4651-0626
Hafidh HassanWhitehead Institute for Biomedical Research, 455 Main St, Cambridge MA 02142.
Yukiko YamashitaWhitehead Institute for Biomedical Research, 455 Main St, Cambridge MA 02142.ORCID 0000-0001-5541-0216

Funding

Combinatorial signal integration in the maintenance and renewal of adult germline stem cell fateK99GM154143 · NIGMS · WHITEHEAD INSTITUTE FOR BIOMEDICAL RES · PI Amelie Raz · 2025 to 2026
$326k
Reprogramming towards a germline stem cell fateF32GM143850 · NIGMS · WHITEHEAD INSTITUTE FOR BIOMEDICAL RES · PI RAZ, AMELIE · 2021 to 2023
$205k
NIGMS NIH HHS F32 GM143850NIGMS NIH HHS K99 GM154143
6 · The paper itself

Abstract

Adult stem cells maintain tissue homeostasis by balancing self-renewal and differentiation. Stem cells themselves are frequently replenished by dedifferentiation of partially differentiated progeny. It is a paradox how stem cells and progeny retain the same potential to be or become stem cells, while undergoing different trajectories of self-renewal, differentiation, and dedifferentiation. Here, we show that Drosophila male germline stem cells (GSCs) solve this paradox via two parallel mechanisms. First, differentiating progeny (spermatogonia) may maintain dedifferentiation-competence by inheriting the transcriptome from GSCs in the form of perdurant mRNA, without actively transcribing these genes. Second, two niche signaling pathways (Bmp and Jak-Stat) activate overlapping but distinct subsets of transcriptional targets, and their combinatorial activity allows equally-potent cells to choose different trajectories. Together, this study reveals how a pool of dedifferentiation-competent progeny is maintained to regenerate stem cells as needed without resulting in tumorigenic stem cell overproduction.

Identifiers

PMID40321206
PMCPMC12047862

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.