Evidence map›Paper›PMID 40319147›Full record

ArticleScientific reports2025

Genome-wide analysis of the BoBZR1 family genes and transcriptome analysis in Brassica oleracea.

Muhammad Asad Ullah, Muhammad Hamza, Rozia Gull, Muhammad Shafiq, Abdul Wahid, Shahab Ahmad, Tayebeh Ahmadi, Mehdi Rahimi

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Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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5 · Who and what money

Authors and funding

8 authors.

Muhammad Asad UllahDepartment of Plant Breeding and Genetics, Faculty of Agricultural Sciences, University of the Punjab, PO BOX 54590, Lahore, Pakistan. asadullah.plantea@gmail.com.
Muhammad HamzaDepartment of Plant Breeding and Genetics, Faculty of Sciences, PMAS Arid Agriculture University, PO BOX 46000, Rawalpindi, Pakistan.
Rozia GullDepartment of Plant Breeding and Genetics, Faculty of Agriculture, University of Agriculture, PO BOX 38000, Faisalabad, Pakistan.
Muhammad ShafiqDepartment of Horticulture, Faculty of Agricultural Sciences, University of the Punjab, PO BOX 54590, Lahore, Pakistan.
Abdul WahidDepartment of Plant Breeding, College of Agri. Life, Texas A&M University, College Station, TX, 77843, USA.
Shahab AhmadDepartment of Plant Sciences, North Dakota State University, Fargo, ND, 58108-6050, USA.
Tayebeh AhmadiDepartment of Medical Laboratory Science, College of Science, Knowledge University, Kirkuk Road, Erbil, 44001, Iraq.
Mehdi RahimiDepartment of Biotechnology, Institute of Science and High Technology and Environmental Sciences, Graduate University of Advanced Technology, Kerman, Iran. mehdi83ra@yahoo.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The BRASSINAZOLE-RESISTANT 1 genes play a crucial role as key regulators in Brassinosteroid (BR) signaling, which affects various plant developmental and stress-responsive aspects. Understanding regulatory mechanisms via BZR1 in modulating target genes has become a main point in research on plant BR signaling networks. Despite this, the BZR1 functioning in B. oleracea is not elucidated. A complete genome-wide analysis identified 12 BZR1 genes in B. oleracea, categorized into three groups based on their gene motif and structural features. These BoBZR1s were found on eight different chromosomes. Synteny analysis between B. oleracea, Arabidopsis, and potato provided perception into their evolutionary characteristics. Promoter regions of BoBZR1 family genes in B. oleracea have shown specific cis-elements associated with hormones, stress, and plant development. The expression analysis toward cuticular wax biosynthesis revealed that BoBZR1-1, BoBZR1-6, BoBZR1-7, and BoBZR1-10 were upregulated in response to cuticular wax biosynthesis. Differential expressions of BoBZR1 genes were observed for all seven different tested tissues. The whole study involved systematic characterization of the BoBZR1 family, and expression patterns, in BR signaling and its extensive involvement in developmental processes in B. oleracea. Results establish a theoretical foundation for deeper investigation of BoBZR1 structure and functions in B. oleracea, specifically toward regulating plant stress.

Indexed as

BrassicaPlant ProteinsTranscriptomeGene Expression ProfilingGene Expression Regulation, PlantGenome, PlantGenome-Wide Association StudyMultigene FamilyPhylogenyPromoter Regions, GeneticPlant ProteinsBrassica oleraceaBrassinosteroidsBZR1, chromosomal mappingExpression pattern

Identifiers

PMID40319147
PMCPMC12049542

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