Evidence map›Paper›PMID 40319026›Full record

ArticleNature communications2025

Genetic ancestry and population structure in the All of Us Research Program cohort.

Shivam Sharma, Shashwat Deepali Nagar, Priscilla Pemu, Stephan Zuchner, SEEC Consortium, Leonardo Mariño-Ramírez, Robert Meller, I King Jordan

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. GWAS for Periodontitis Phenotypes Using Multi-Ancestry All of Us Research Platform.medRxiv : the preprint server for health sciences · 2025
    Article
  13. Elevated BBlood neoplasia · 2025
    Article
  14. Article
  15. African ancestry-enriched variants in themedRxiv : the preprint server for health sciences · 2025
    Article
  16. Review
  17. Cross Biobank Comparison of Phenomic Profiles.AMIA ... Annual Symposium proceedings. AMIA Symposium · 2024
    Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Shivam SharmaSchool of Biological Sciences, Georgia Institute of Technology, Atlanta, GA, USA.ORCID http://orcid.org/0000-0003-3577-1596
Shashwat Deepali NagarSchool of Biological Sciences, Georgia Institute of Technology, Atlanta, GA, USA.
Priscilla PemuMorehouse School of Medicine, Atlanta, GA, USA.
Stephan ZuchnerSEEC Investigators, University of Miami, Coral Gables, FL, USA.ORCID http://orcid.org/0000-0002-8498-5235
SEEC Consortium
Leonardo Mariño-RamírezNational Institute on Minority Health and Health Disparities, National Institutes of Health, Bethesda, MD, USA.ORCID http://orcid.org/0000-0002-5716-8512
Robert MellerMorehouse School of Medicine, Atlanta, GA, USA. RMeller@msm.edu.ORCID http://orcid.org/0000-0003-3528-8019
I King JordanSchool of Biological Sciences, Georgia Institute of Technology, Atlanta, GA, USA. king.jordan@biology.gatech.edu.ORCID http://orcid.org/0000-0003-4996-2203

Funding

All of Us Research Program Data and Research CenterOT2OD035404 · OD · VANDERBILT UNIVERSITY MEDICAL CENTER · PI Melissa Basford, DAVID GLAZER · 2023 to 2026
$210.4M
Technology to Empower Changes in Health (TECH) Network Participant Technologies CenterU24OD023176 · OD · SCRIPPS RESEARCH INSTITUTE, THE · PI TOPOL, ERIC JEFFREY · 2016 to 2022
$204.7M
PTSC 2.0OT2OD030043 · OD · VIGNET, INC. · PI BEGALE, MARK, JAIN, NEETA · 2020 to 2025
$191.1M
Precision Medicine Initiative Cohort Program BiobankU24OD023121 · OD · MAYO CLINIC ROCHESTER · PI CEKANOVA, MARIA, CICEK, MINE · 2016 to 2024
$185.5M
University of Arizona-Banner Health All of Us Research Program OT2OD026549 · OD · UNIVERSITY OF ARIZONA · PI MORENO, FRANCISCO A, REIMAN, ERIC MICHAEL · 2018 to 2023
$78.9M
All of Us PennsylvaniaOT2OD026554 · OD · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI REIS, STEVEN E, VISWESWARAN, SHYAM · 2018 to 2023
$72.1M
New York City Consortium for Precision MedicineOT2OD026556 · OD · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI BIER, LOUISE E, GHARAVI, ALI G · 2018 to 2023
$67.3M
SouthEast Enrollment Center (SEEC) OT2OD026551 · OD · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI CARRASQUILLO, OLVEEN, COLON, VIVIAN · 2018 to 2023
$62.8M
Illinois Precision Medicine Consortium OT2OD026557 · OD · NORTHWESTERN UNIVERSITY AT CHICAGO · PI AHSAN, HABIBUL, ARGOS, MARIA · 2018 to 2023
$60.5M
AOURP FQHC PHASE III75N98019F01202 · OD · MITRE CORPORATION · PI GRAND, JOAN · 2022 to 2023
$32.8M
Todos Juntos: All of Us Research ProgramOT2OD025277 · OD · NATIONAL ALLIANCE FOR HISPANIC HEALTH · PI ADOLPH P FALCON, EDGAR GIL RICO · 2017 to 2026
$20.8M
PRIDEnet for the All of Us Research Program OT2OD025276 · OD · STANFORD UNIVERSITY · PI LUNN, MITCHELL RYAN, OBEDIN-MALIVER, JUNO · 2017 to 2024
$13.0M
NHGRI NIH HHS RM1 HG012334NIH HHS OT2 OD025276NIH HHS OT2 OD025277NIH HHS OT2 OD025315NIH HHS OT2 OD025337NIH HHS OT2 OD026549NIH HHS OT2 OD026551NIH HHS OT2 OD026554NIH HHS OT2 OD026556NIH HHS OT2 OD026557NIH HHS OT2 OD030043NIH HHS OT2 OD035404NIH HHS U24 OD023121NIH HHS U24 OD023176NINDS NIH HHS R01 NS112422ODCDC CDC HHS U24 OD023176U.S. Department of Health & Human Services | National Institutes of Health (NIH) 1 OT2 OD025276U.S. Department of Health & Human Services | National Institutes of Health (NIH) 1 OT2 OD025277U.S. Department of Health & Human Services | National Institutes of Health (NIH) 1 OT2 OD025337U.S. Department of Health & Human Services | National Institutes of Health (NIH) 1 OT2 OD026549U.S. Department of Health & Human Services | National Institutes of Health (NIH) 1 OT2 OD026554U.S. Department of Health & Human Services | National Institutes of Health (NIH) 1 OT2 OD026556U.S. Department of Health & Human Services | National Institutes of Health (NIH) 1 OT2 OD026557U.S. Department of Health & Human Services | National Institutes of Health (NIH) 1 OT2 OD030043U.S. Department of Health & Human Services | National Institutes of Health (NIH) 1 OT2 OD35404U.S. Department of Health & Human Services | National Institutes of Health (NIH) 1 RM1 HG012334U.S. Department of Health & Human Services | National Institutes of Health (NIH) 1 U24 OD023121U.S. Department of Health & Human Services | National Institutes of Health (NIH) 1 ZIAMD000016U.S. Department of Health & Human Services | National Institutes of Health (NIH) 1 ZIAMD000018.U.S. Department of Health & Human Services | National Institutes of Health (NIH) 3 OT2 OD025315U.S. Department of Health & Human Services | National Institutes of Health (NIH) 5 R01 NS112422U.S. Department of Health & Human Services | National Institutes of Health (NIH) 75N98019F01202U.S. Department of Health & Human Services | National Institutes of Health (NIH) AOD 16037
6 · The paper itself

Abstract

We analyzed participant genomic variant data to characterize population structure and genetic ancestry for the All of Us cohort (n = 297,549). There is substantial population structure in the cohort, with clusters of closely related participants interspersed among less related individuals. Participants show diverse genetic ancestry, with major contributions from European (66.4%), African (19.5%), Asian (7.6%), and American (6.3%) continental ancestry components. Participant genetic similarity clusters show group-specific ancestry, with distinct patterns of continental and subcontinental ancestry among groups. African and American ancestry are enriched in the southeast and southwest regions of the country, respectively, whereas European ancestry is more evenly distributed across the US. The diversity of All of Us participants' genetic ancestry is negatively correlated with age; younger participants show higher levels of genetic admixture compared to older participants. Our results underscore the ancestral genetic diversity of the All of Us cohort, a crucial prerequisite for genomic health equity.

Indexed as

Genetics, PopulationAdultAgedAsianBlack or African AmericanBlack PeopleCohort StudiesFemaleGenetic VariationHumansIndians, North AmericanMaleMiddle AgedUnited StatesWhiteYoung Adult

Identifiers

PMID40319026
PMCPMC12049439

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.