Evidence map›Paper›PMID 40317041›Full record

ArticleAntimicrobial resistance and infection control2025

High rate of multi-drug resistant Escherichia coli isolated from patients with urinary tract infections in Ifakara-Tanzania: implications for empirical antibiotic treatment guidelines and stewardship programs.

Magreth Erick Macha, Philipp Kohler, Anja Bösch, Honorathy Msami Urassa, Weihong Qi, Salome N Seiffert, Sabine Haller, Erin West, Maja Weisser Rohacek, Baharak Babouee Flury

Abstract read
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Article in Antimicrobial resistance and infection control, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Magreth Erick MachaSt. Francis University College of Health and Allied Sciences, P.O. Box 175, Ifakara, Tanzania. magretherick@yahoo.com.
Philipp KohlerHOCH, Cantonal Hospital St. Gallen, Division of Infectious Diseases, Infection Prevention and Travel Medicine, St. Gallen, Switzerland.
Anja BöschHOCH, Cantonal Hospital St. Gallen, Medical Research Center, St. Gallen, Switzerland.
Honorathy Msami UrassaSt. Francis Regional Referral Hospital, Ifakara, Tanzania.
Weihong QiFunctional Genomics Center Zurich, University of Zurich / ETH Zurich, Zurich, Switzerland.
Salome N SeiffertDivision of Human Microbiology, Centre for Laboratory Medicine, St. Gallen, Switzerland.
Sabine HallerHOCH, Cantonal Hospital St. Gallen, Division of Infectious Diseases, Infection Prevention and Travel Medicine, St. Gallen, Switzerland.
Erin WestHOCH, Cantonal Hospital St. Gallen, Clinical Trials Unit, St. Gallen, Switzerland.
Maja Weisser RohacekDivision of Infectious Diseases, University Hospital Basel, Basel, Switzerland.
Baharak Babouee FluryHOCH, Cantonal Hospital St. Gallen, Medical Research Center, St. Gallen, Switzerland.

Funding

Federal Government (Swiss Government Excellence Scholarships) 0673
6 · The paper itself

Abstract

backgroundAntimicrobial resistance (AMR) in Sub-Saharan Africa is a significant health threat, with limited data guide treatment. This study investigates multi-drug resistant Escherichia coli in urinary tract infections (UTIs) in rural Tanzania to guide empirical treatment strategies.

methodsA cross-sectional prospective study of adults with UTIs was conducted at St. Francis Regional Referral Hospital in Ifakara, Tanzania, from September 2021 to August 2023. Urine culture isolates underwent routine diagnostics in Tanzania and E. coli isolates underwent whole-genome sequencing in Switzerland.

resultsOf 1055 patients, 248 (23.5%) had positive urine cultures, with E. coli as predominant pathogen (n = 87; 55.7%). Extended-spectrum beta-lactamase-producing E. coli (ESBL-E) was identified in 20 (23.0%) isolates, primarily sequence type ST167 carrying CTX-M-27. All ESBL-E cases (20/20, 100.0%) and half of non-ESBL-E cases (29/58, 50.0%) received empiric antibiotics to which the isolates were documented as resistant. ESBL-E showed higher resistance to cotrimoxazole (100.0%) and ciprofloxacin (90.0%) latter recommended for complicated UTIs in Tanzania's Standard Treatment Guidelines (STG) compared to non-ESBL-E. All ESBL-E isolates were susceptible to nitrofurantoin, as recommended by STG for uncomplicated UTIs, and fosfomycin showed potential alternative for complicated cases.

conclusionNearly one-quarter of E. coli isolates causing UTIs were ESBL-E, predominantly ST167 harboring bla

Indexed as

Anti-Bacterial AgentsAntimicrobial StewardshipDrug Resistance, Multiple, BacterialEscherichia coliEscherichia coli InfectionsUrinary Tract InfectionsAdultAgedCross-Sectional StudiesFemaleHumansMaleMicrobial Sensitivity TestsMiddle AgedProspective StudiesTanzaniaAnti-Bacterial AgentsMulti-drug resistant Escherichia coliRural-TanzaniaTreatment guidelinesUrinary tract infections

Identifiers

PMID40317041
PMCPMC12046935

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.