Evidence map›Paper›PMID 40316909›Full record

ArticleBMC plant biology2025

Genome-wide identification of the regulatory network of mitogen-activated protein kinase signaling cascades gene families in Hevea Brasiliensis.

Xiaojuan Huang, Manman Sun, Xiaoyu Du, Lin Quan, Jinquan Chao, Xiaomin Deng, Hongze Liao

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Article in BMC plant biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

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2citing papers in PubMed
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1 · What the graph read from it

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3 · Its place in the literature

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2 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

7 authors.

Xiaojuan Huang *Guangxi Key Laboratory of Polysaccharide Materials and Modification, School of Marine Sciences and Biotechnology, Guangxi Minzu University, 158 West Daxue Road, Nanning, 530008, China.
Manman Sun *Guangxi Key Laboratory of Polysaccharide Materials and Modification, School of Marine Sciences and Biotechnology, Guangxi Minzu University, 158 West Daxue Road, Nanning, 530008, China.
Xiaoyu DuNational Key Laboratory for Tropical Crop Breeding, Ministry of Agriculture and Rural Affairs Key Laboratory of Biology and Genetic Resources of Rubber Tree, State Key Laboratory Breeding Base of Cultivation and Physiology for Tropical CropsRubber Research Institute, Chinese Academy of Tropical Agricultural Sciences, Haikou, 570100, China.
Lin QuanGuangxi Key Laboratory of Polysaccharide Materials and Modification, School of Marine Sciences and Biotechnology, Guangxi Minzu University, 158 West Daxue Road, Nanning, 530008, China.
Jinquan ChaoNational Key Laboratory for Tropical Crop Breeding, Ministry of Agriculture and Rural Affairs Key Laboratory of Biology and Genetic Resources of Rubber Tree, State Key Laboratory Breeding Base of Cultivation and Physiology for Tropical CropsRubber Research Institute, Chinese Academy of Tropical Agricultural Sciences, Haikou, 570100, China.
Xiaomin DengNational Key Laboratory for Tropical Crop Breeding, Ministry of Agriculture and Rural Affairs Key Laboratory of Biology and Genetic Resources of Rubber Tree, State Key Laboratory Breeding Base of Cultivation and Physiology for Tropical CropsRubber Research Institute, Chinese Academy of Tropical Agricultural Sciences, Haikou, 570100, China. dxmbio822@163.com.
Hongze LiaoGuangxi Key Laboratory of Polysaccharide Materials and Modification, School of Marine Sciences and Biotechnology, Guangxi Minzu University, 158 West Daxue Road, Nanning, 530008, China. hzliao@gxmzu.edu.cn.

Funding

Chinese Academy of Tropical Agricultural Sciences for Science and Technology Innovation Team of National Tropical Agricultural Science Center CATASCXTD202413Guangxi Minzu University Research Fund 2021KJQD18Hainan Provincial Natural Science Foundation of China 325CXTD621National Key Research and Development Program of China 2023YFA0914800National Natural Science Foundation of China 31800578National Training Program of Innovation and Entrepreneurship for Undergraduates 202310608030The Xiangsi Lake Youth Scholar Innovation Team of Guangxi Minzu University 2023GXUNXSHQN03
6 · The paper itself

Abstract

backgroundThe mitogen-activated protein kinase (MPK) cascade pathway represents a highly conserved signal transduction mechanism in plants, playing a crucial role in growth, development, and stress response. Nevertheless, systematic analysis on the MPK cascade genes in rubber trees remains unexplored.

resultsWe conducted a comprehensive identification of the MPK cascade gene family of Hevea brasiliensis, identifying a total of 20 HbMPKs, 13 HbMPKKs, and 167 HbMAPKKKs genes. Through phylogenetic analysis and compared to Arabidopsis MPK cascade genes, HbMPKs and HbMPKKs were categorized into categorized four subgroups with no significant expansion or contraction, while the notably expanded HbMAPKKKs were divided into three subgroups: Raf, ZIK, and MEKK. Conserved motifs, gene structure, and motif analysis further bolster the validity of phylogenetic classification. Furthermore, expression profiling analysis based on public transcriptomic data revealed that these genes were differentially expressed in various tissues and differentially regulated in response to different stresses. Among them, the genes highly expressed in latex or the upregulated genes after tapped including HbMPK8, HbMPK12, HbMPK19, HbMPKK6, HbMPKK9, HbMPKKK15, HbMPKKK21 might be related to latex development and natural rubber (NR) yield. Through yeast two-hybrid assays, we successfully pinpointed 34 pairs of HbMPKKK-HbMPKK-HbMPK interaction modules. Integrating the interaction network and gene expression patterns, 12 potential HbMPK cascade signaling modules including HbMPKKK6/41/79-HbMPKK1-HbMPK9/12/15 and HbMPKKK6/14/21/41/79-HbMPKK9-HbMPK9/15 might involve in NR production and stress responses.

conclusionsOur study comprehensively unveils the multidimensional characteristics of the MPK cascade gene family in rubber trees and successfully identifies its core signaling cascade module, laying a crucial foundation for future in-depth exploration of the biological functions of the MPK cascade signaling module in rubber trees.

Indexed as

Gene Regulatory NetworksHeveaMAP Kinase Signaling SystemMitogen-Activated Protein KinasesMultigene FamilyPlant ProteinsGene Expression ProfilingGene Expression Regulation, PlantGenome, PlantPhylogenyMitogen-Activated Protein KinasesPlant ProteinsGene familyHevea brasiliensisKinasesMPK cascade

Identifiers

PMID40316909
PMCPMC12049021

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.