Evidence map›Paper›PMID 40316679›Full record

ArticleScientific reports2025

Biodiversity and biogeography of zooxanthellate soft corals across the Indo-Pacific.

Catherine S McFadden, Katie L Erickson, Audra Lane, Bibiana Nassongole, Steven Aguilar, Sabra K Dunakey, Kathleen M Durkin, Jue A A Lalas, Yuka Kushida, Laura Macrina and 18 more

Abstract read
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

28 authors.

Catherine S McFaddenDepartment of Biology, Harvey Mudd College, Claremont, CA, 91711, USA. mcfadden@hmc.edu.
Katie L EricksonDepartment of Biology, Harvey Mudd College, Claremont, CA, 91711, USA.
Audra LaneDepartment of Biology, Harvey Mudd College, Claremont, CA, 91711, USA.
Bibiana NassongoleCESAM and Biology Department, University of Aveiro, Campus de Santiago, 3810-193, Aveiro, Portugal.
Steven AguilarDepartment of Biology, Harvey Mudd College, Claremont, CA, 91711, USA.
Sabra K DunakeyDepartment of Biology, Harvey Mudd College, Claremont, CA, 91711, USA.
Kathleen M DurkinDepartment of Biology, Harvey Mudd College, Claremont, CA, 91711, USA.
Jue A A LalasThe Marine Science Institute, College of Science, University of the Philippines, Diliman, 1101, Quezon City, Philippines.
Yuka KushidaMolecular Invertebrate Systematics and Ecology Lab, Graduate School of Engineering and Science, University of the Ryukyus, 1 Senbaru, Nishihara, Okinawa, 903-0213, Japan.
Laura MacrinaMarine Science Program, Division of Biological and Environmental Science and Engineering, King Abdullah University of Science and Technology (KAUST), 23955-6900, Thuwal, Saudi Arabia.
Natalie P MinorDepartment of Biology, Harvey Mudd College, Claremont, CA, 91711, USA.
Mildred Morales-ParedesDepartment of Biology, Harvey Mudd College, Claremont, CA, 91711, USA.
Josephine NelsonDepartment of Biology, Harvey Mudd College, Claremont, CA, 91711, USA.
Asha PeddadaDepartment of Biology, Harvey Mudd College, Claremont, CA, 91711, USA.
Sophie PooleDepartment of Biology, Harvey Mudd College, Claremont, CA, 91711, USA.
Rafael PortoDepartment of Biology, Harvey Mudd College, Claremont, CA, 91711, USA.
Risa Purow-RudermanDepartment of Biology, Harvey Mudd College, Claremont, CA, 91711, USA.
Karen E SnyderDepartment of Biology, Harvey Mudd College, Claremont, CA, 91711, USA.
Theo WismarDepartment of Biology, Harvey Mudd College, Claremont, CA, 91711, USA.
Kaveh Samimi-NaminMarine Evolution and Ecology Group, Naturalis Biodiversity Center, P.O. Box 9517, 2300 RA, Leiden, The Netherlands.
Maria Vanessa Baria-RodriguezThe Marine Science Institute, College of Science, University of the Philippines, Diliman, 1101, Quezon City, Philippines.
Francesca BenzoniMarine Science Program, Division of Biological and Environmental Science and Engineering, King Abdullah University of Science and Technology (KAUST), 23955-6900, Thuwal, Saudi Arabia.
Danwei HuangLee Kong Chian Natural History Museum, National University of Singapore, Singapore, 117377, Singapore.
James D ReimerMolecular Invertebrate Systematics and Ecology Lab, Graduate School of Engineering and Science, University of the Ryukyus, 1 Senbaru, Nishihara, Okinawa, 903-0213, Japan.
Gustav PaulayFlorida Museum of Natural History, University of Florida, Gainesville, FL, 32611, USA.
Andrea M QuattriniDepartment of Invertebrate Zoology, National Museum of Natural History, Smithsonian Institution, Washington, DC, USA.
Merrick EkinsQueensland Museum, South Brisbane BC, QLD, 4101, Australia.
Yehuda BenayahuSchool of Zoology, George S. Wise Faculty of Life Science, Tel Aviv University, 69978, Ramat Aviv, Israel.

Funding

Harvey Mudd College Emily Mudd Summer Research FundHarvey Mudd College Munzer Summer Research FundHarvey Mudd College Rasmussen Summer Research FundKing Abdullah University of Science and Technology baseline fundsNational Science Foundation DEB-1856245National Science Foundation DEB-1929319United States - Israel Binational Science Foundation BSF-2019624
6 · The paper itself

Abstract

Documentation of biodiversity and its geographical distribution is necessary to understand the processes and drivers of evolutionary diversification as well as to guide conservation and management initiatives. Among the most emblematic patterns of biodiversity in the world's oceans is the Coral Triangle (Indo-Australian Archipelago), widely recognized to be the center of species richness for a variety of marine life forms. The distribution of biodiversity remains incompletely documented, however, for a majority of reef-associated invertebrate taxa, including the zooxanthellate soft corals (Octocorallia) that dominate hard substrate on many Indo-Pacific reefs. We used a genetic approach to document the diversity of Indo-Pacific soft corals, sequencing two single-locus barcoding markers for > 4400 soft coral specimens and assigning individuals to molecular operational taxonomic units as proxies of species. We document two centers of species richness for zooxanthellate soft corals, one in the Indo-Australian Archipelago and a second, equally diverse center in the Western Indian Ocean. Centers of endemicity for soft corals are coincident with these centers of species richness, although the peripheral Red Sea and Hawaii also support high proportions of endemic taxa. The patterns documented here suggest that biogeographic distributions of soft coral families may be driven in part by larval dispersal potential: taxa with benthic larvae are absent from most oceanic islands of the central Pacific and are represented by higher proportions of endemic taxa in other geographic regions. Our findings demonstrate the distinct biogeographic patterns among reef taxa and underscore the need to document and analyze species distributions of more reef-associated invertebrate groups to derive a complete picture of reef biogeography.

Indexed as

AnthozoaBiodiversityAnimalsAustraliaCoral ReefsDNA Barcoding, TaxonomicIndian OceanPacific OceanPhylogenyPhylogeographyDNA barcodeEndemismLarval dispersalMarine provincesMolecular operational taxonomic unitMOTUSpecies richnessWestern Indian Ocean

Identifiers

PMID40316679
PMCPMC12048517

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.