Evidence map›Paper›PMID 40316627›Full record

ArticleScientific reports2025

Exploring prokaryotic diversity in permafrost-affected soils of Ladakh's Changthang region and its geochemical drivers.

Ahmad Ali, Phuntsog Dolma, Tatiana A Vishnivetskaya, Tsewang Namgail, Tundup Dolma, Archana Chauhan

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Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

6 authors.

Ahmad AliDepartment of Zoology, Panjab University, Sector 14, Chandigarh, 160014, India.
Phuntsog DolmaDepartment of Zoology, Panjab University, Sector 14, Chandigarh, 160014, India.
Tatiana A VishnivetskayaDepartment of Microbiology, University of Tennessee, Knoxville, TN, 37996, USA.
Tsewang NamgailSnow Leopard Conservancy India Trust, Leh, Ladakh, 194101, India.
Tundup DolmaDepartment of Environment Studies, Panjab University, Sector 14, Chandigarh, 160014, India.
Archana ChauhanDepartment of Zoology, Panjab University, Sector 14, Chandigarh, 160014, India. achauhan@pu.ac.in.

Funding

Department of Science and Technology, Science and Engineering Research Board (DST-SERB), India ECR/2016/000698US Department of Energy, Office of Science, Office of Biological and Environmental Research, Genomic Science Program DE-SC0020369
6 · The paper itself

Abstract

Global warming due to climate change has substantial impact on high-altitude permafrost affected soils. This raises a serious concern that the microbial degradation of sequestered carbon can result in alteration of the biogeochemical cycles. Therefore, the characterization of permafrost affected soil microbiomes, especially of unexplored high-altitude, low oxygen arid region, is important for predicting their response to climate change. This study presents the first report of the bacterial diversity of permafrost-affected soils in the Changthang region of Ladakh. The relationship between soil pH, organic carbon, electrical conductivity, and available micronutrients with the microbial diversity was investigated. Amplicon sequencing of permafrost affected soil samples from Jukti and Tsokar showed that Proteobacteria and Actinobacteria were the dominant phyla in all samples. The genera Brevitalea, Chthoniobacter, Sphingomonas, Hydrogenispora, Clostridium, Gaiella, Gemmatimonas were relatively abundant in the Jukti samples whereas the genera Thiocapsa, Actinotalea, Syntrophotalea, Antracticibcterium, Luteolibacter, Nitrospirillum dominated the Tsokar sample. Correlation analyses highlighted the influence of soil geochemical parameters on the bacterial community structure. PCoA analyses showed that the bacterial beta diversity varied significantly between the sampling locations (PERMANOVA test (F-value: 2.3316; R

Indexed as

BacteriaMicrobiotaPermafrostSoilSoil MicrobiologyBiodiversityChinaPhylogenyRNA, Ribosomal, 16SRNA, Ribosomal, 16SSoil16S rRNAAlpine permafrostBacteriaIllumina sequencingMicrobiome

Identifiers

PMID40316627
PMCPMC12048601

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