Evidence map›Paper›PMID 40315208›Full record

ArticlePloS one2025

Can explainable AI classify shrike (Laniidae) eggs by uncovering species-wide pigmentation patterns?

Paweł Pstrokoński, Łukasz Roszkowiak, Anna Korzyńska, Wojciech Wójcik, Martin Päckert, Joanna Rosenberger, Dominika Mierzwa-Szymkowiak, Magdalena Sepkowska, Jan Lontkowski, Marek Słupek and 1 more

Abstract read
In one paragraph

Article in PloS one, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Paweł PstrokońskiDepartment of Animal Breeding, Institute of Animal Sciences, Warsaw University of Life Sciences, Warsaw, Poland.ORCID https://orcid.org/0000-0003-2728-2223
Łukasz RoszkowiakLaboratory of Processing and Analysis of Microscopic Images, Nalecz Institute of Biocybernetics and Biomedical Engineering PAS, Warsaw, Poland.
Anna KorzyńskaLaboratory of Processing and Analysis of Microscopic Images, Nalecz Institute of Biocybernetics and Biomedical Engineering PAS, Warsaw, Poland.
Wojciech WójcikDepartment of Animal Breeding, Institute of Animal Sciences, Warsaw University of Life Sciences, Warsaw, Poland.ORCID https://orcid.org/0000-0001-8066-9924
Martin PäckertSenckenberg Natural History Collections Dresden, Dresden, Germany.ORCID https://orcid.org/0000-0001-5045-0139
Joanna RosenbergerDivision of Poultry Breeding, Faculty of Biology, Institute of Animal Breeding, Wroclaw University of Environmental and Life Sciences, Wroclaw, Poland.ORCID https://orcid.org/0000-0001-8169-6377
Dominika Mierzwa-SzymkowiakMuseum and Institute of Zoology, Polish Academy of Sciences, Warsaw, Poland.ORCID https://orcid.org/0000-0002-5851-5619
Magdalena SepkowskaCount Antoni Ostrowski Museum in Tomaszow Mazowiecki, Tomaszow Mazowiecki, Poland.
Jan LontkowskiMuseum of Natural History, Wroclaw University, Wroclaw, Poland.
Marek SłupekMuseum of Jacek Malczewski in Radom, Radom, Poland.
Krzysztof DamaziakDepartment of Animal Breeding, Institute of Animal Sciences, Warsaw University of Life Sciences, Warsaw, Poland.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The complex patterns on bird eggs, characterized by their replicability, distinctiveness, and intricacy, play significant roles in avian biology, including camouflage, protection from brood parasites, protecting embryos, nest identification, strengthening eggshells, and female sexual selection. The genus Lanius, known for its distinctive pigmentation patterns, shows considerable variability within species, making it an intriguing but poorly understood group. We applied Explainable AI (XAI) methods to uncover pigmentation patterns that represent species-wide identification signatures. To do this, we used Convolutional Neural Networks (CNNs) to classify shrike eggs and explore potential correlations between egg identification and eggshell patterns. Our CNN model achieved over 95% accuracy in predicting species, but identifying specific discriminative features proved difficult, as the model only highlighted general trends. This method could help organize collections and verify species affiliation in global ornithological collections, which often face challenges such as missing or illegible labels. CNNs can enhance species identification and improve the accuracy of ornithological studies. Despite some challenges, the potential applications of this research in avian biology and museum collections are promising. It offers new insights into the role of eggshell patterns in avian evolutionary strategies. This approach not only enriches our understanding of egg pigmentation but also contributes to advancements in studies spanning from ecology to biomedical research.

Indexed as

OvumPasseriformesPigmentationAnimalsBirdsEgg ShellFemaleNeural Networks, ComputerSpecies Specificity

Identifiers

PMID40315208
PMCPMC12047758

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.