Evidence map›Paper›PMID 40313410›Full record

ArticleFrontiers in microbiology2025

Comparative metagenomic analysis reveals the adaptive evolutionary traits of siboglinid tubeworm symbionts.

Jinyi Liu, Yingli Zhou, Jingchun Feng, Chaofeng Cai, Si Zhang

Abstract read
In one paragraph

Article in Frontiers in microbiology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

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4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Jinyi LiuResearch Centre of Ecology and Environment for Coastal Area and Deep Sea, Guangdong University of Technology, Guangzhou, China.
Yingli ZhouSouthern Marine Science and Engineering Guangdong Laboratory (Guangzhou), Guangzhou, China.
Jingchun FengResearch Centre of Ecology and Environment for Coastal Area and Deep Sea, Guangdong University of Technology, Guangzhou, China.
Chaofeng CaiResearch Centre of Ecology and Environment for Coastal Area and Deep Sea, Guangdong University of Technology, Guangzhou, China.
Si ZhangResearch Centre of Ecology and Environment for Coastal Area and Deep Sea, Guangdong University of Technology, Guangzhou, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Tubeworms flourish in marine cold seeps and hydrothermal vents through the establishment of symbiotic relationships with chemosynthetic bacteria. However, the environmental adaptations and evolutionary relationships of tubeworm symbionts across diverse habitats and hosts remain largely unknown. In this study, we characterized the genomes of 26 siboglinid tubeworm symbionts collected from deep-sea hydrothermal vents, cold seeps, and deep-sea mud, including two sequenced in this study and 24 previously published. Phylogenetic analysis classified the 26 symbiont genomes into five distinct clusters at the genus level. The findings highlight the remarkable diversity in symbiont classification, influenced by the habitat and species of tubeworm, with the symbiont genome characteristics of various genera revealing unique evolutionary strategies. Siboglinid symbionts exhibit functional metabolic diversity, encompassing chemical autotrophic capabilities for carbon, nitrogen, and sulfur metabolism, hydrogen oxidation, and a chemoorganotrophic ability to utilize various amino acids, cofactors, and vitamins. Furthermore, the symbiont's homeostatic mechanisms and CRISPR-Cas system are vital adaptations for survival. Overall, this study highlights the metabolic traits of siboglinid symbionts across different genera and enhances our understanding of how different habitats and hosts influence symbiont evolution, offering valuable insights into the strategies that symbionts use to adapt and thrive in extreme environments.

Indexed as

adaptive evolutionarycomparative metagenomedeep-sea environmentmetabolic diversitySiboglinid symbiont

Identifiers

PMID40313410
PMCPMC12045306

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.