ArticleBMC plant biology2025
Comparative analysis of synteny and functional divergence of APX genes in Fragaria vesca and Fragaria×ananassa.
Article in BMC plant biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.
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2 citing papers in PubMed.
- TheInternational journal of molecular sciences · 2026Article
- Molecular Mechanisms in Responses to Combined Stresses in Strawberry.Current issues in molecular biology · 2026Review
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Abstract
backgroundAscorbate peroxidase (APX) is a key enzyme that removes reactive oxygen species (ROS) in the ascorbic acid-glutathione cycle. Although APX genes have been reported in many species, comparative analysis of genome-wide, promoters, and gene functions between F. vesca (Fragaria vesca L.) and F. × ananassa (Fragaria×ananassa Duch.) have not been comprehensively explored.
resultsIn this study, seven FvAPX and twenty FaAPX genes were divided into five subgroups. By comparative analysis of the 5 motifs between F. vesca and F. × ananassa, it was found that some fragments were gained/lost. These amino acid fragments might be closely related to the function of the APX genes. Synteny analysis of F. vesca and F. × ananassa showed that there were more collinearity genes with grapes. Compared with F. × ananassa, the FvAPX2, FvAPX3, FvAPX4, and FvAPX6 proteins were more likely to use Val and Leu in F. vesca. The RT‒qPCR results confirmed that FaAPX5 and FvAPX7 were obviously upregulated under the NaCl, PEG, and H
conclusionsCollectively, our study provides comprehensive insight regarding the evolutionary relationship between F. vesca and F. × ananassa and offers substantial opportunities for further research on the functions of APX genes.
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